Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ID1-201ENST00000376105 1233 ntBASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 UBE2DNL-204ENST00000602536 740 ntBASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
KRTAP4-3Q9BYR4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 OR7E47P-201ENST00000546390 1422 ntBASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 MFSD11-216ENST00000590393 1141 ntBASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 AL050303.2-201ENST00000619798 666 ntBASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
KRTAP4-3Q9BYR4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
KRTAP4-3Q9BYR4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
KRTAP4-3Q9BYR4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
KRTAP4-3Q9BYR4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC7.28□□□□□ -1.24
KRTAP4-3Q9BYR4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
KRTAP4-3Q9BYR4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC7.28□□□□□ -1.24
KRTAP4-3Q9BYR4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
KRTAP4-3Q9BYR4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
KRTAP4-3Q9BYR4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms