Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.69■■□□□ 1.06
PHOX2BQ99453 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHOX2BQ99453 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.69■■□□□ 1.06
PHOX2BQ99453 AC016405.3-201ENST00000607710 860 ntBASIC21.69■■□□□ 1.06
PHOX2BQ99453 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PHOX2BQ99453 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHOX2BQ99453 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHOX2BQ99453 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHOX2BQ99453 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHOX2BQ99453 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHOX2BQ99453 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PHOX2BQ99453 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.68■■□□□ 1.06
PHOX2BQ99453 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PHOX2BQ99453 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHOX2BQ99453 RCN1P1-201ENST00000400413 996 ntBASIC21.68■■□□□ 1.06
PHOX2BQ99453 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.68■■□□□ 1.06
PHOX2BQ99453 AP003097.1-201ENST00000530657 1135 ntBASIC21.68■■□□□ 1.06
PHOX2BQ99453 BX088651.1-201ENST00000540551 451 ntBASIC21.68■■□□□ 1.06
PHOX2BQ99453 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.68■■□□□ 1.06
PHOX2BQ99453 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
PHOX2BQ99453 FP325331.1-202ENST00000623531 1380 ntBASIC21.68■■□□□ 1.06
PHOX2BQ99453 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHOX2BQ99453 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHOX2BQ99453 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHOX2BQ99453 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHOX2BQ99453 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
PHOX2BQ99453 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHOX2BQ99453 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PHOX2BQ99453 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PHOX2BQ99453 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.67■■□□□ 1.06
PHOX2BQ99453 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHOX2BQ99453 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHOX2BQ99453 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.67■■□□□ 1.06
PHOX2BQ99453 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PHOX2BQ99453 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PHOX2BQ99453 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PHOX2BQ99453 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PHOX2BQ99453 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.67■■□□□ 1.06
PHOX2BQ99453 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.67■■□□□ 1.06
PHOX2BQ99453 KRT18P35-201ENST00000510488 1269 ntBASIC21.67■■□□□ 1.06
PHOX2BQ99453 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PHOX2BQ99453 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.67■■□□□ 1.06
PHOX2BQ99453 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHOX2BQ99453 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHOX2BQ99453 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PHOX2BQ99453 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHOX2BQ99453 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PHOX2BQ99453 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHOX2BQ99453 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.66■■□□□ 1.06
PHOX2BQ99453 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PHOX2BQ99453 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PHOX2BQ99453 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 AC091874.3-201ENST00000512672 1195 ntBASIC21.65■■□□□ 1.06
PHOX2BQ99453 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 FAM197Y4-202ENST00000622692 608 ntBASIC21.65■■□□□ 1.06
PHOX2BQ99453 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 AC142381.3-201ENST00000568208 1670 ntBASIC21.65■■□□□ 1.06
PHOX2BQ99453 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PHOX2BQ99453 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHOX2BQ99453 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PHOX2BQ99453 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PHOX2BQ99453 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PHOX2BQ99453 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PHOX2BQ99453 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.64■■□□□ 1.05
PHOX2BQ99453 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.64■■□□□ 1.05
PHOX2BQ99453 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.64■■□□□ 1.05
PHOX2BQ99453 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.64■■□□□ 1.05
PHOX2BQ99453 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PHOX2BQ99453 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.64■■□□□ 1.05
PHOX2BQ99453 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PHOX2BQ99453 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PHOX2BQ99453 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PHOX2BQ99453 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PHOX2BQ99453 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.63■■□□□ 1.05
PHOX2BQ99453 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PHOX2BQ99453 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms