Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.84■□□□□ 0.45
GAFA1Q96PS6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.83■□□□□ 0.45
GAFA1Q96PS6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GAFA1Q96PS6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
GAFA1Q96PS6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GAFA1Q96PS6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 YBX1P1-201ENST00000445822 960 ntBASIC17.83■□□□□ 0.44
GAFA1Q96PS6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.83■□□□□ 0.44
GAFA1Q96PS6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 AC055733.4-201ENST00000638462 1354 ntBASIC17.82■□□□□ 0.44
GAFA1Q96PS6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 AC123595.1-201ENST00000440769 1046 ntBASIC17.82■□□□□ 0.44
GAFA1Q96PS6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAFA1Q96PS6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAFA1Q96PS6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 LINC02228-203ENST00000641970 1355 ntBASIC17.8■□□□□ 0.44
GAFA1Q96PS6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAFA1Q96PS6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 AC010542.4-201ENST00000563151 1910 ntBASIC17.79■□□□□ 0.44
GAFA1Q96PS6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.79■□□□□ 0.44
GAFA1Q96PS6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.78■□□□□ 0.44
GAFA1Q96PS6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms