Protein–RNA interactions for Protein: Q96FV3

TSPAN17, Tetraspanin-17, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17Q96FV3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN17Q96FV3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.24■□□□□ 0.99
TSPAN17Q96FV3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN17Q96FV3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.24■□□□□ 0.99
TSPAN17Q96FV3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 AC026471.6-201ENST00000622954 1905 ntBASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN17Q96FV3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.22■□□□□ 0.99
TSPAN17Q96FV3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TSPAN17Q96FV3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN17Q96FV3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 AP004607.7-201ENST00000527152 1677 ntBASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 AL136116.3-201ENST00000402907 1138 ntBASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.19■□□□□ 0.98
TSPAN17Q96FV3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN17Q96FV3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms