Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
IFT43Q96FT9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.95■■□□□ 1.11
IFT43Q96FT9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
IFT43Q96FT9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
IFT43Q96FT9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.95■■□□□ 1.1
IFT43Q96FT9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.95■■□□□ 1.1
IFT43Q96FT9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.95■■□□□ 1.1
IFT43Q96FT9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
IFT43Q96FT9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
IFT43Q96FT9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.95■■□□□ 1.1
IFT43Q96FT9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
IFT43Q96FT9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
IFT43Q96FT9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.94■■□□□ 1.1
IFT43Q96FT9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
IFT43Q96FT9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IFT43Q96FT9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
IFT43Q96FT9 AC027612.3-201ENST00000413684 1047 ntBASIC21.94■■□□□ 1.1
IFT43Q96FT9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.94■■□□□ 1.1
IFT43Q96FT9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.94■■□□□ 1.1
IFT43Q96FT9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.94■■□□□ 1.1
IFT43Q96FT9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.94■■□□□ 1.1
IFT43Q96FT9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IFT43Q96FT9 OXCT2P1-201ENST00000447263 1535 ntBASIC21.94■■□□□ 1.1
IFT43Q96FT9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.94■■□□□ 1.1
IFT43Q96FT9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT43Q96FT9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT43Q96FT9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT43Q96FT9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT43Q96FT9 AC123595.1-201ENST00000440769 1046 ntBASIC21.93■■□□□ 1.1
IFT43Q96FT9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.93■■□□□ 1.1
IFT43Q96FT9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.93■■□□□ 1.1
IFT43Q96FT9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
IFT43Q96FT9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
IFT43Q96FT9 LINC00526-201ENST00000581067 1875 ntBASIC21.93■■□□□ 1.1
IFT43Q96FT9 AL354811.1-201ENST00000610286 706 ntBASIC21.93■■□□□ 1.1
IFT43Q96FT9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.93■■□□□ 1.1
IFT43Q96FT9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
IFT43Q96FT9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.92■■□□□ 1.1
IFT43Q96FT9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
IFT43Q96FT9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.92■■□□□ 1.1
IFT43Q96FT9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.92■■□□□ 1.1
IFT43Q96FT9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.92■■□□□ 1.1
IFT43Q96FT9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
IFT43Q96FT9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.92■■□□□ 1.1
IFT43Q96FT9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT43Q96FT9 AC092053.2-201ENST00000640557 1818 ntBASIC21.92■■□□□ 1.1
IFT43Q96FT9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
IFT43Q96FT9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT43Q96FT9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.91■■□□□ 1.1
IFT43Q96FT9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT43Q96FT9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT43Q96FT9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT43Q96FT9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT43Q96FT9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.91■■□□□ 1.1
IFT43Q96FT9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT43Q96FT9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 OR7E47P-201ENST00000546390 1422 ntBASIC21.9■■□□□ 1.1
IFT43Q96FT9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT43Q96FT9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT43Q96FT9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IFT43Q96FT9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT43Q96FT9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT43Q96FT9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.9■■□□□ 1.1
IFT43Q96FT9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms