Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM54Q969K7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM54Q969K7 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.91■□□□□ 0.62
TMEM54Q969K7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM54Q969K7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.91■□□□□ 0.62
TMEM54Q969K7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TMEM54Q969K7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM54Q969K7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM54Q969K7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM54Q969K7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM54Q969K7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TMEM54Q969K7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TMEM54Q969K7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM54Q969K7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM54Q969K7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM54Q969K7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM54Q969K7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM54Q969K7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TMEM54Q969K7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM54Q969K7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.89■□□□□ 0.62
TMEM54Q969K7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.89■□□□□ 0.62
TMEM54Q969K7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TMEM54Q969K7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM54Q969K7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TMEM54Q969K7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM54Q969K7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM54Q969K7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM54Q969K7 AC104564.3-201ENST00000582367 638 ntBASIC18.89■□□□□ 0.61
TMEM54Q969K7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM54Q969K7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM54Q969K7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM54Q969K7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM54Q969K7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM54Q969K7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM54Q969K7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TMEM54Q969K7 AC005224.4-201ENST00000583262 1652 ntBASIC18.89■□□□□ 0.61
TMEM54Q969K7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM54Q969K7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM54Q969K7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TMEM54Q969K7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM54Q969K7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM54Q969K7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM54Q969K7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM54Q969K7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TMEM54Q969K7 AC055733.4-201ENST00000638462 1354 ntBASIC18.88■□□□□ 0.61
TMEM54Q969K7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM54Q969K7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM54Q969K7 AC003102.1-202ENST00000563394 1796 ntBASIC18.88■□□□□ 0.61
TMEM54Q969K7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TMEM54Q969K7 AC244015.2-201ENST00000616358 1861 ntBASIC18.88■□□□□ 0.61
TMEM54Q969K7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM54Q969K7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEM54Q969K7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TMEM54Q969K7 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEM54Q969K7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM54Q969K7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEM54Q969K7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM54Q969K7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM54Q969K7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM54Q969K7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM54Q969K7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM54Q969K7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM54Q969K7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM54Q969K7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM54Q969K7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM54Q969K7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM54Q969K7 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.86■□□□□ 0.61
TMEM54Q969K7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM54Q969K7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM54Q969K7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
TMEM54Q969K7 TPRG1LP1-201ENST00000598702 760 ntBASIC18.86■□□□□ 0.61
TMEM54Q969K7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM54Q969K7 MIR6084-201ENST00000622012 110 ntBASIC18.86■□□□□ 0.61
TMEM54Q969K7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM54Q969K7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM54Q969K7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM54Q969K7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TMEM54Q969K7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TMEM54Q969K7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TMEM54Q969K7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TMEM54Q969K7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TMEM54Q969K7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TMEM54Q969K7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms