Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF4Q92544 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF4Q92544 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF4Q92544 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF4Q92544 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF4Q92544 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF4Q92544 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF4Q92544 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF4Q92544 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF4Q92544 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF4Q92544 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF4Q92544 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF4Q92544 AC010141.3-201ENST00000456659 717 ntBASIC20.16■□□□□ 0.82
TM9SF4Q92544 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF4Q92544 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.16■□□□□ 0.82
TM9SF4Q92544 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.16■□□□□ 0.82
TM9SF4Q92544 TPRG1LP1-201ENST00000598702 760 ntBASIC20.16■□□□□ 0.82
TM9SF4Q92544 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TM9SF4Q92544 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF4Q92544 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF4Q92544 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.15■□□□□ 0.82
TM9SF4Q92544 KRT19P1-201ENST00000405746 1186 ntBASIC20.15■□□□□ 0.82
TM9SF4Q92544 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.15■□□□□ 0.82
TM9SF4Q92544 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TM9SF4Q92544 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.15■□□□□ 0.82
TM9SF4Q92544 AC080038.1-201ENST00000611274 1154 ntBASIC20.15■□□□□ 0.82
TM9SF4Q92544 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.15■□□□□ 0.82
TM9SF4Q92544 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.15■□□□□ 0.82
TM9SF4Q92544 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF4Q92544 AC004687.1-201ENST00000579003 1625 ntBASIC20.15■□□□□ 0.82
TM9SF4Q92544 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF4Q92544 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
TM9SF4Q92544 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.15■□□□□ 0.82
TM9SF4Q92544 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF4Q92544 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.14■□□□□ 0.81
TM9SF4Q92544 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
TM9SF4Q92544 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.14■□□□□ 0.81
TM9SF4Q92544 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TM9SF4Q92544 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.14■□□□□ 0.81
TM9SF4Q92544 AC006015.1-201ENST00000429970 570 ntBASIC20.14■□□□□ 0.81
TM9SF4Q92544 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TM9SF4Q92544 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.14■□□□□ 0.81
TM9SF4Q92544 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF4Q92544 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF4Q92544 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TM9SF4Q92544 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF4Q92544 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 AL024507.2-201ENST00000606070 2574 ntBASIC20.13■□□□□ 0.81
TM9SF4Q92544 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.13■□□□□ 0.81
TM9SF4Q92544 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF4Q92544 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM9SF4Q92544 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM9SF4Q92544 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TM9SF4Q92544 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM9SF4Q92544 AC242852.2-201ENST00000615738 1807 ntBASIC20.11■□□□□ 0.81
TM9SF4Q92544 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM9SF4Q92544 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM9SF4Q92544 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM9SF4Q92544 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TM9SF4Q92544 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM9SF4Q92544 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.11■□□□□ 0.81
TM9SF4Q92544 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.11■□□□□ 0.81
TM9SF4Q92544 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.11■□□□□ 0.81
TM9SF4Q92544 AC079630.1-202ENST00000618127 1840 ntBASIC20.11■□□□□ 0.81
TM9SF4Q92544 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM9SF4Q92544 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.11■□□□□ 0.81
TM9SF4Q92544 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms