Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
STAG1Q8WVM7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.33■■□□□ 1.65
STAG1Q8WVM7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.33■■□□□ 1.65
STAG1Q8WVM7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.33■■□□□ 1.65
STAG1Q8WVM7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
STAG1Q8WVM7 AC022517.1-201ENST00000592429 346 ntBASIC25.33■■□□□ 1.65
STAG1Q8WVM7 FAM99A-202ENST00000538190 1989 ntBASIC25.33■■□□□ 1.64
STAG1Q8WVM7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.32■■□□□ 1.64
STAG1Q8WVM7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 NTF6G-201ENST00000591094 616 ntBASIC25.31■■□□□ 1.64
STAG1Q8WVM7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
STAG1Q8WVM7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG1Q8WVM7 AC026471.6-201ENST00000622954 1905 ntBASIC25.3■■□□□ 1.64
STAG1Q8WVM7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG1Q8WVM7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
STAG1Q8WVM7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
STAG1Q8WVM7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG1Q8WVM7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
STAG1Q8WVM7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 AC079140.4-201ENST00000507448 529 ntBASIC25.29■■□□□ 1.64
STAG1Q8WVM7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
STAG1Q8WVM7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG1Q8WVM7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
STAG1Q8WVM7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG1Q8WVM7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
STAG1Q8WVM7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
STAG1Q8WVM7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.28■■□□□ 1.64
STAG1Q8WVM7 KRT18P61-201ENST00000585825 1298 ntBASIC25.28■■□□□ 1.64
STAG1Q8WVM7 EP400NL-214ENST00000641289 2402 ntBASIC25.28■■□□□ 1.64
STAG1Q8WVM7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
STAG1Q8WVM7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 IKBKGP1-201ENST00000612193 1073 ntBASIC25.27■■□□□ 1.64
STAG1Q8WVM7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
STAG1Q8WVM7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.26■■□□□ 1.63
STAG1Q8WVM7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 C11orf96-202ENST00000528572 1834 ntBASIC25.25■■□□□ 1.63
STAG1Q8WVM7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
STAG1Q8WVM7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms