Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 AC011298.3-201ENST00000615796 283 ntBASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCHCR1Q8TD31 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 AC079089.2-201ENST00000531211 1277 ntBASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 AL139246.5-201ENST00000606645 996 ntBASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 AC135279.3-201ENST00000610945 1311 ntBASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCHCR1Q8TD31 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 PBX2P1-201ENST00000493219 1291 ntBASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCHCR1Q8TD31 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CCHCR1Q8TD31 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
CCHCR1Q8TD31 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CCHCR1Q8TD31 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CCHCR1Q8TD31 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 AC110285.6-201ENST00000617652 491 ntBASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 AC133637.1-201ENST00000624115 1537 ntBASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
CCHCR1Q8TD31 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 AC024257.2-201ENST00000549699 147 ntBASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 AC068587.7-201ENST00000641602 218 ntBASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCHCR1Q8TD31 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 Z98882.1-201ENST00000622160 2253 ntBASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 AC106739.1-201ENST00000617035 715 ntBASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 AC136469.2-201ENST00000623944 1028 ntBASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.18■■□□□ 1.14
CCHCR1Q8TD31 AC092667.1-201ENST00000434301 2586 ntBASIC22.17■■□□□ 1.14
CCHCR1Q8TD31 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.17■■□□□ 1.14
CCHCR1Q8TD31 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.17■■□□□ 1.14
CCHCR1Q8TD31 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCHCR1Q8TD31 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.17■■□□□ 1.14
CCHCR1Q8TD31 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms