Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 DUX4L19-201ENST00000557448 1267 ntBASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.56■□□□□ 0.88
ZFP28Q8NHY6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFP28Q8NHY6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 AC068587.7-201ENST00000641602 218 ntBASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZFP28Q8NHY6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 AL138724.1-201ENST00000606771 1088 ntBASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 SYT6-210ENST00000641643 1587 ntBASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFP28Q8NHY6 AC007952.6-201ENST00000573168 2673 ntBASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 AC003957.1-201ENST00000625108 2673 ntBASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 OR2I1P-207ENST00000453522 948 ntBASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 AC131281.2-201ENST00000520478 145 ntBASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 AL031602.1-201ENST00000633169 911 ntBASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZFP28Q8NHY6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
ZFP28Q8NHY6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
ZFP28Q8NHY6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZFP28Q8NHY6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.52■□□□□ 0.87
ZFP28Q8NHY6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 MIR4466-201ENST00000606121 54 ntBASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFP28Q8NHY6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms