Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 AC004812.2-201ENST00000611079 2094 ntBASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 AC026366.1-201ENST00000488803 879 ntBASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.34■■□□□ 1.17
SMRP1Q8NCR6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 UNC93B5-201ENST00000530315 699 ntBASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
SMRP1Q8NCR6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.33■■□□□ 1.16
SMRP1Q8NCR6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SMRP1Q8NCR6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 AC008550.1-201ENST00000511500 884 ntBASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 AL162412.1-201ENST00000567129 965 ntBASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 AC073648.6-201ENST00000641589 218 ntBASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMRP1Q8NCR6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 AC010980.2-201ENST00000587099 1412 ntBASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SMRP1Q8NCR6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 AP003097.1-201ENST00000530657 1135 ntBASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.3■■□□□ 1.16
SMRP1Q8NCR6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 AL034346.1-201ENST00000568244 1277 ntBASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMRP1Q8NCR6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms