Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC16.76■□□□□ 0.27
C3orf56Q8N813 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C3orf56Q8N813 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.76■□□□□ 0.27
C3orf56Q8N813 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C3orf56Q8N813 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
C3orf56Q8N813 MIR1224-201ENST00000408193 85 ntBASIC16.76■□□□□ 0.27
C3orf56Q8N813 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C3orf56Q8N813 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C3orf56Q8N813 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.76■□□□□ 0.27
C3orf56Q8N813 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
C3orf56Q8N813 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.76■□□□□ 0.27
C3orf56Q8N813 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C3orf56Q8N813 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C3orf56Q8N813 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
C3orf56Q8N813 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.76■□□□□ 0.27
C3orf56Q8N813 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 AC093787.1-201ENST00000450396 207 ntBASIC16.75■□□□□ 0.27
C3orf56Q8N813 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 AC008550.1-201ENST00000511500 884 ntBASIC16.75■□□□□ 0.27
C3orf56Q8N813 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.75■□□□□ 0.27
C3orf56Q8N813 AC083880.1-201ENST00000608266 535 ntBASIC16.75■□□□□ 0.27
C3orf56Q8N813 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
C3orf56Q8N813 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.74■□□□□ 0.27
C3orf56Q8N813 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
C3orf56Q8N813 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.74■□□□□ 0.27
C3orf56Q8N813 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
C3orf56Q8N813 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C3orf56Q8N813 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
C3orf56Q8N813 MIR718-201ENST00000390190 70 ntBASIC16.74■□□□□ 0.27
C3orf56Q8N813 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.74■□□□□ 0.27
C3orf56Q8N813 AC007322.4-201ENST00000509611 723 ntBASIC16.74■□□□□ 0.27
C3orf56Q8N813 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.74■□□□□ 0.27
C3orf56Q8N813 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.74■□□□□ 0.27
C3orf56Q8N813 AC079630.1-202ENST00000618127 1840 ntBASIC16.74■□□□□ 0.27
C3orf56Q8N813 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
C3orf56Q8N813 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C3orf56Q8N813 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C3orf56Q8N813 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
C3orf56Q8N813 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
C3orf56Q8N813 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.73■□□□□ 0.27
C3orf56Q8N813 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.73■□□□□ 0.27
C3orf56Q8N813 UBE2SP1-201ENST00000450587 669 ntBASIC16.73■□□□□ 0.27
C3orf56Q8N813 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.73■□□□□ 0.27
C3orf56Q8N813 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.73■□□□□ 0.27
C3orf56Q8N813 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.73■□□□□ 0.27
C3orf56Q8N813 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.73■□□□□ 0.27
C3orf56Q8N813 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C3orf56Q8N813 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C3orf56Q8N813 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.73■□□□□ 0.27
C3orf56Q8N813 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C3orf56Q8N813 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.72■□□□□ 0.27
C3orf56Q8N813 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.72■□□□□ 0.27
C3orf56Q8N813 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
C3orf56Q8N813 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.72■□□□□ 0.27
C3orf56Q8N813 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.72■□□□□ 0.27
C3orf56Q8N813 AL353803.4-201ENST00000565882 1934 ntBASIC16.72■□□□□ 0.27
C3orf56Q8N813 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C3orf56Q8N813 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.71■□□□□ 0.27
C3orf56Q8N813 AL121749.1-202ENST00000609313 2153 ntBASIC16.71■□□□□ 0.27
C3orf56Q8N813 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C3orf56Q8N813 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.71■□□□□ 0.27
C3orf56Q8N813 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.71■□□□□ 0.27
C3orf56Q8N813 AC026366.1-201ENST00000488803 879 ntBASIC16.71■□□□□ 0.27
C3orf56Q8N813 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C3orf56Q8N813 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.71■□□□□ 0.27
C3orf56Q8N813 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.71■□□□□ 0.27
C3orf56Q8N813 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
C3orf56Q8N813 AC120498.10-201ENST00000621827 505 ntBASIC16.71■□□□□ 0.27
C3orf56Q8N813 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C3orf56Q8N813 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C3orf56Q8N813 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C3orf56Q8N813 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C3orf56Q8N813 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms