Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AP004607.7-201ENST00000527152 1677 ntBASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 NTF6G-201ENST00000591094 616 ntBASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH20Q8N6Y1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH20Q8N6Y1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH20Q8N6Y1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDH20Q8N6Y1 AC139530.1-201ENST00000575312 1977 ntBASIC21.83■■□□□ 1.08
PCDH20Q8N6Y1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH20Q8N6Y1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDH20Q8N6Y1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH20Q8N6Y1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 AC127496.7-201ENST00000625110 1798 ntBASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH20Q8N6Y1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 GUSBP5-202ENST00000510805 1989 ntBASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH20Q8N6Y1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH20Q8N6Y1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 AC079140.4-201ENST00000507448 529 ntBASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 AC092666.2-201ENST00000613287 246 ntBASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH20Q8N6Y1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCDH20Q8N6Y1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
PCDH20Q8N6Y1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH20Q8N6Y1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDH20Q8N6Y1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH20Q8N6Y1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH20Q8N6Y1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH20Q8N6Y1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 AC055733.4-201ENST00000638462 1354 ntBASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH20Q8N6Y1 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms