Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 TERF1P2-201ENST00000583350 1212 ntBASIC22.79■■□□□ 1.24
TTC39CQ8N584 MIR6821-201ENST00000617625 74 ntBASIC22.79■■□□□ 1.24
TTC39CQ8N584 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TTC39CQ8N584 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC39CQ8N584 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.79■■□□□ 1.24
TTC39CQ8N584 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TTC39CQ8N584 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.78■■□□□ 1.24
TTC39CQ8N584 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.78■■□□□ 1.24
TTC39CQ8N584 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC39CQ8N584 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC39CQ8N584 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.78■■□□□ 1.24
TTC39CQ8N584 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TTC39CQ8N584 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC39CQ8N584 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
TTC39CQ8N584 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.78■■□□□ 1.24
TTC39CQ8N584 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TTC39CQ8N584 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TTC39CQ8N584 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC39CQ8N584 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
TTC39CQ8N584 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC39CQ8N584 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC39CQ8N584 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC39CQ8N584 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TTC39CQ8N584 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TTC39CQ8N584 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TTC39CQ8N584 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC39CQ8N584 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TTC39CQ8N584 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC39CQ8N584 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC39CQ8N584 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 AC104564.3-201ENST00000582367 638 ntBASIC22.76■■□□□ 1.23
TTC39CQ8N584 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC39CQ8N584 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC39CQ8N584 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.76■■□□□ 1.23
TTC39CQ8N584 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TTC39CQ8N584 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 AC079140.4-201ENST00000507448 529 ntBASIC22.75■■□□□ 1.23
TTC39CQ8N584 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.75■■□□□ 1.23
TTC39CQ8N584 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.75■■□□□ 1.23
TTC39CQ8N584 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.75■■□□□ 1.23
TTC39CQ8N584 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.75■■□□□ 1.23
TTC39CQ8N584 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.75■■□□□ 1.23
TTC39CQ8N584 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TTC39CQ8N584 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC39CQ8N584 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
TTC39CQ8N584 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC39CQ8N584 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC39CQ8N584 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC39CQ8N584 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC39CQ8N584 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
TTC39CQ8N584 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC39CQ8N584 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC39CQ8N584 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC39CQ8N584 CCDC92B-201ENST00000575506 885 ntBASIC22.74■■□□□ 1.23
TTC39CQ8N584 EP400NL-214ENST00000641289 2402 ntBASIC22.74■■□□□ 1.23
TTC39CQ8N584 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC39CQ8N584 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC39CQ8N584 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC39CQ8N584 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.73■■□□□ 1.23
TTC39CQ8N584 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TTC39CQ8N584 KRT18P14-201ENST00000534205 1250 ntBASIC22.73■■□□□ 1.23
TTC39CQ8N584 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.73■■□□□ 1.23
TTC39CQ8N584 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.73■■□□□ 1.23
TTC39CQ8N584 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC39CQ8N584 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC39CQ8N584 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC39CQ8N584 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms