Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 AC005332.8-201ENST00000622750 2735 ntBASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST3H2BBQ8N257 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST3H2BBQ8N257 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST3H2BBQ8N257 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
HIST3H2BBQ8N257 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms