Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DDX60Q8IY21 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.68■■□□□ 1.86
DDX60Q8IY21 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.68■■□□□ 1.86
DDX60Q8IY21 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.68■■□□□ 1.86
DDX60Q8IY21 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX60Q8IY21 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
DDX60Q8IY21 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX60Q8IY21 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.68■■□□□ 1.86
DDX60Q8IY21 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DDX60Q8IY21 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.68■■□□□ 1.86
DDX60Q8IY21 AC013268.1-206ENST00000638368 961 ntBASIC26.68■■□□□ 1.86
DDX60Q8IY21 AC112229.1-201ENST00000639295 961 ntBASIC26.68■■□□□ 1.86
DDX60Q8IY21 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX60Q8IY21 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
DDX60Q8IY21 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
DDX60Q8IY21 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX60Q8IY21 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
DDX60Q8IY21 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX60Q8IY21 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
DDX60Q8IY21 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.66■■□□□ 1.86
DDX60Q8IY21 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.66■■□□□ 1.86
DDX60Q8IY21 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX60Q8IY21 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
DDX60Q8IY21 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
DDX60Q8IY21 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX60Q8IY21 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.66■■□□□ 1.86
DDX60Q8IY21 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.66■■□□□ 1.86
DDX60Q8IY21 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX60Q8IY21 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX60Q8IY21 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
DDX60Q8IY21 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.65■■□□□ 1.86
DDX60Q8IY21 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.65■■□□□ 1.86
DDX60Q8IY21 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
DDX60Q8IY21 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX60Q8IY21 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX60Q8IY21 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX60Q8IY21 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX60Q8IY21 AC139530.1-201ENST00000575312 1977 ntBASIC26.64■■□□□ 1.86
DDX60Q8IY21 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
DDX60Q8IY21 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.64■■□□□ 1.85
DDX60Q8IY21 AC007322.4-201ENST00000509611 723 ntBASIC26.64■■□□□ 1.85
DDX60Q8IY21 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX60Q8IY21 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.63■■□□□ 1.85
DDX60Q8IY21 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX60Q8IY21 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX60Q8IY21 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX60Q8IY21 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
DDX60Q8IY21 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.63■■□□□ 1.85
DDX60Q8IY21 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX60Q8IY21 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX60Q8IY21 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.62■■□□□ 1.85
DDX60Q8IY21 AF201337.1-201ENST00000520239 748 ntBASIC26.62■■□□□ 1.85
DDX60Q8IY21 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.62■■□□□ 1.85
DDX60Q8IY21 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DDX60Q8IY21 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX60Q8IY21 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX60Q8IY21 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX60Q8IY21 SLC29A4P1-201ENST00000398760 971 ntBASIC26.62■■□□□ 1.85
DDX60Q8IY21 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.62■■□□□ 1.85
DDX60Q8IY21 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
DDX60Q8IY21 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.62■■□□□ 1.85
DDX60Q8IY21 MIR4651-201ENST00000582622 73 ntBASIC26.62■■□□□ 1.85
DDX60Q8IY21 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX60Q8IY21 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX60Q8IY21 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.61■■□□□ 1.85
DDX60Q8IY21 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.61■■□□□ 1.85
DDX60Q8IY21 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.61■■□□□ 1.85
DDX60Q8IY21 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.61■■□□□ 1.85
DDX60Q8IY21 AC053503.5-201ENST00000601508 636 ntBASIC26.61■■□□□ 1.85
DDX60Q8IY21 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
DDX60Q8IY21 AC068338.2-201ENST00000563278 1430 ntBASIC26.61■■□□□ 1.85
DDX60Q8IY21 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX60Q8IY21 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX60Q8IY21 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX60Q8IY21 AC069152.1-201ENST00000438030 544 ntBASIC26.6■■□□□ 1.85
DDX60Q8IY21 AC083906.2-201ENST00000511578 360 ntBASIC26.6■■□□□ 1.85
DDX60Q8IY21 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.6■■□□□ 1.85
DDX60Q8IY21 KRT18P6-201ENST00000555540 1265 ntBASIC26.6■■□□□ 1.85
DDX60Q8IY21 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.6■■□□□ 1.85
DDX60Q8IY21 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.6■■□□□ 1.85
DDX60Q8IY21 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX60Q8IY21 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX60Q8IY21 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX60Q8IY21 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX60Q8IY21 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX60Q8IY21 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX60Q8IY21 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX60Q8IY21 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
DDX60Q8IY21 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms