Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MIR4466-201ENST00000606121 54 ntBASIC21.3■■□□□ 1
CRLF3Q8IUI8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRLF3Q8IUI8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRLF3Q8IUI8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CRLF3Q8IUI8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRLF3Q8IUI8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRLF3Q8IUI8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRLF3Q8IUI8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRLF3Q8IUI8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.29■■□□□ 1
CRLF3Q8IUI8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.29■■□□□ 1
CRLF3Q8IUI8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CRLF3Q8IUI8 FEM1AP4-201ENST00000443167 1987 ntBASIC21.29■■□□□ 1
CRLF3Q8IUI8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.29■■□□□ 1
CRLF3Q8IUI8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.29■■□□□ 1
CRLF3Q8IUI8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRLF3Q8IUI8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.29■■□□□ 1
CRLF3Q8IUI8 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.29■■□□□ 1
CRLF3Q8IUI8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.29■■□□□ 1
CRLF3Q8IUI8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRLF3Q8IUI8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRLF3Q8IUI8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRLF3Q8IUI8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRLF3Q8IUI8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CRLF3Q8IUI8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CRLF3Q8IUI8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.28■■□□□ 1
CRLF3Q8IUI8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.28■■□□□ 1
CRLF3Q8IUI8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.28■■□□□ 1
CRLF3Q8IUI8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CRLF3Q8IUI8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CRLF3Q8IUI8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 AF106564.1-201ENST00000607058 2553 ntBASIC21.27■■□□□ 1
CRLF3Q8IUI8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CRLF3Q8IUI8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.27■■□□□ 1
CRLF3Q8IUI8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CRLF3Q8IUI8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.27■■□□□ 1
CRLF3Q8IUI8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.27■■□□□ 1
CRLF3Q8IUI8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CRLF3Q8IUI8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CRLF3Q8IUI8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CRLF3Q8IUI8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CRLF3Q8IUI8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CRLF3Q8IUI8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.27■□□□□ 0.99
CRLF3Q8IUI8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.26■□□□□ 0.99
CRLF3Q8IUI8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CRLF3Q8IUI8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CRLF3Q8IUI8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CRLF3Q8IUI8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CRLF3Q8IUI8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms