Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RNF180Q86T96 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
RNF180Q86T96 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF180Q86T96 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
RNF180Q86T96 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF180Q86T96 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
RNF180Q86T96 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.89■■□□□ 1.41
RNF180Q86T96 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RNF180Q86T96 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.89■■□□□ 1.41
RNF180Q86T96 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.89■■□□□ 1.41
RNF180Q86T96 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
RNF180Q86T96 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.89■■□□□ 1.41
RNF180Q86T96 AC120498.10-201ENST00000621827 505 ntBASIC23.89■■□□□ 1.41
RNF180Q86T96 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF180Q86T96 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
RNF180Q86T96 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.88■■□□□ 1.41
RNF180Q86T96 BX276092.2-201ENST00000417668 665 ntBASIC23.88■■□□□ 1.41
RNF180Q86T96 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.88■■□□□ 1.41
RNF180Q86T96 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF180Q86T96 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.88■■□□□ 1.41
RNF180Q86T96 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.88■■□□□ 1.41
RNF180Q86T96 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.88■■□□□ 1.41
RNF180Q86T96 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.88■■□□□ 1.41
RNF180Q86T96 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF180Q86T96 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF180Q86T96 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
RNF180Q86T96 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF180Q86T96 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF180Q86T96 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF180Q86T96 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RNF180Q86T96 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.87■■□□□ 1.41
RNF180Q86T96 RARRES2P4-201ENST00000514074 484 ntBASIC23.87■■□□□ 1.41
RNF180Q86T96 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF180Q86T96 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF180Q86T96 AP006294.2-201ENST00000641667 209 ntBASIC23.87■■□□□ 1.41
RNF180Q86T96 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF180Q86T96 ANOS2P-203ENST00000472227 1816 ntBASIC23.87■■□□□ 1.41
RNF180Q86T96 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF180Q86T96 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF180Q86T96 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF180Q86T96 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF180Q86T96 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF180Q86T96 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF180Q86T96 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
RNF180Q86T96 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.86■■□□□ 1.41
RNF180Q86T96 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.86■■□□□ 1.41
RNF180Q86T96 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF180Q86T96 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF180Q86T96 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF180Q86T96 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF180Q86T96 AP006587.3-201ENST00000525742 1516 ntBASIC23.85■■□□□ 1.41
RNF180Q86T96 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF180Q86T96 AC092068.2-201ENST00000590491 1708 ntBASIC23.85■■□□□ 1.41
RNF180Q86T96 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF180Q86T96 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF180Q86T96 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
RNF180Q86T96 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF180Q86T96 AC097658.1-201ENST00000475555 843 ntBASIC23.85■■□□□ 1.41
RNF180Q86T96 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF180Q86T96 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF180Q86T96 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.85■■□□□ 1.41
RNF180Q86T96 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF180Q86T96 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF180Q86T96 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF180Q86T96 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF180Q86T96 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF180Q86T96 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RNF180Q86T96 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF180Q86T96 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RNF180Q86T96 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
RNF180Q86T96 DUSP5P2-201ENST00000426873 1033 ntBASIC23.84■■□□□ 1.41
RNF180Q86T96 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF180Q86T96 RPS2P52-201ENST00000469610 820 ntBASIC23.84■■□□□ 1.41
RNF180Q86T96 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.84■■□□□ 1.41
RNF180Q86T96 AC008175.2-201ENST00000612840 297 ntBASIC23.84■■□□□ 1.41
RNF180Q86T96 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RNF180Q86T96 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF180Q86T96 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF180Q86T96 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF180Q86T96 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RNF180Q86T96 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.83■■□□□ 1.41
RNF180Q86T96 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RNF180Q86T96 AC083880.1-201ENST00000608266 535 ntBASIC23.83■■□□□ 1.41
RNF180Q86T96 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms