Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHFQ7M4L6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.29■□□□□ 0.68
SHFQ7M4L6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.29■□□□□ 0.68
SHFQ7M4L6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHFQ7M4L6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHFQ7M4L6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SHFQ7M4L6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SHFQ7M4L6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHFQ7M4L6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 AL121603.2-201ENST00000557373 2117 ntBASIC19.28■□□□□ 0.68
SHFQ7M4L6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 UNC93B8-201ENST00000511903 705 ntBASIC19.28■□□□□ 0.68
SHFQ7M4L6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.28■□□□□ 0.68
SHFQ7M4L6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHFQ7M4L6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHFQ7M4L6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHFQ7M4L6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHFQ7M4L6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHFQ7M4L6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHFQ7M4L6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SHFQ7M4L6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.27■□□□□ 0.68
SHFQ7M4L6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.27■□□□□ 0.68
SHFQ7M4L6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHFQ7M4L6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SHFQ7M4L6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SHFQ7M4L6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHFQ7M4L6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHFQ7M4L6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHFQ7M4L6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHFQ7M4L6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHFQ7M4L6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SHFQ7M4L6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHFQ7M4L6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHFQ7M4L6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.25■□□□□ 0.67
SHFQ7M4L6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SHFQ7M4L6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.25■□□□□ 0.67
SHFQ7M4L6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SHFQ7M4L6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SHFQ7M4L6 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.25■□□□□ 0.67
SHFQ7M4L6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SHFQ7M4L6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.25■□□□□ 0.67
SHFQ7M4L6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHFQ7M4L6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SHFQ7M4L6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SHFQ7M4L6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 KRT16P3-201ENST00000439127 1283 ntBASIC19.24■□□□□ 0.67
SHFQ7M4L6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.24■□□□□ 0.67
SHFQ7M4L6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.24■□□□□ 0.67
SHFQ7M4L6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SHFQ7M4L6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHFQ7M4L6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SHFQ7M4L6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHFQ7M4L6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms