Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.21■■□□□ 1.47
SHC4Q6S5L8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHC4Q6S5L8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.21■■□□□ 1.47
SHC4Q6S5L8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SHC4Q6S5L8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHC4Q6S5L8 BX842568.3-201ENST00000418104 571 ntBASIC24.2■■□□□ 1.46
SHC4Q6S5L8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.2■■□□□ 1.46
SHC4Q6S5L8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.2■■□□□ 1.46
SHC4Q6S5L8 AC003102.1-202ENST00000563394 1796 ntBASIC24.2■■□□□ 1.46
SHC4Q6S5L8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.2■■□□□ 1.46
SHC4Q6S5L8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHC4Q6S5L8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SHC4Q6S5L8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.2■■□□□ 1.46
SHC4Q6S5L8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 AL136162.1-201ENST00000607711 1078 ntBASIC24.19■■□□□ 1.46
SHC4Q6S5L8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SHC4Q6S5L8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SHC4Q6S5L8 AC104564.3-201ENST00000582367 638 ntBASIC24.18■■□□□ 1.46
SHC4Q6S5L8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHC4Q6S5L8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 AL034346.1-201ENST00000568244 1277 ntBASIC24.16■■□□□ 1.46
SHC4Q6S5L8 SMUG1P1-201ENST00000590640 811 ntBASIC24.16■■□□□ 1.46
SHC4Q6S5L8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHC4Q6S5L8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 AC233992.3-201ENST00000607491 485 ntBASIC24.15■■□□□ 1.46
SHC4Q6S5L8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.15■■□□□ 1.46
SHC4Q6S5L8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
SHC4Q6S5L8 AL024507.2-201ENST00000606070 2574 ntBASIC24.14■■□□□ 1.46
SHC4Q6S5L8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.14■■□□□ 1.46
SHC4Q6S5L8 AC135279.3-201ENST00000610945 1311 ntBASIC24.14■■□□□ 1.46
SHC4Q6S5L8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
SHC4Q6S5L8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHC4Q6S5L8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SHC4Q6S5L8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.14■■□□□ 1.45
SHC4Q6S5L8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.14■■□□□ 1.45
SHC4Q6S5L8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHC4Q6S5L8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.13■■□□□ 1.45
SHC4Q6S5L8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SHC4Q6S5L8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHC4Q6S5L8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.13■■□□□ 1.45
SHC4Q6S5L8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.13■■□□□ 1.45
SHC4Q6S5L8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHC4Q6S5L8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SHC4Q6S5L8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SHC4Q6S5L8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.12■■□□□ 1.45
SHC4Q6S5L8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SHC4Q6S5L8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHC4Q6S5L8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHC4Q6S5L8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.12■■□□□ 1.45
SHC4Q6S5L8 AP006587.3-201ENST00000525742 1516 ntBASIC24.12■■□□□ 1.45
SHC4Q6S5L8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SHC4Q6S5L8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.12■■□□□ 1.45
SHC4Q6S5L8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms