Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4BQ5SQS7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D4BQ5SQS7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SH2D4BQ5SQS7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH2D4BQ5SQS7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D4BQ5SQS7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH2D4BQ5SQS7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH2D4BQ5SQS7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SH2D4BQ5SQS7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH2D4BQ5SQS7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SH2D4BQ5SQS7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH2D4BQ5SQS7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SH2D4BQ5SQS7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.08■□□□□ 0.97
SH2D4BQ5SQS7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SH2D4BQ5SQS7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH2D4BQ5SQS7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SH2D4BQ5SQS7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH2D4BQ5SQS7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.08■□□□□ 0.96
SH2D4BQ5SQS7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 Z98882.1-201ENST00000622160 2253 ntBASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.07■□□□□ 0.96
SH2D4BQ5SQS7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 AC073130.3-201ENST00000624389 2278 ntBASIC21.06■□□□□ 0.96
SH2D4BQ5SQS7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D4BQ5SQS7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms