Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.25■□□□□ 0.83
TRA2BP62995 AP006587.3-201ENST00000525742 1516 ntBASIC20.25■□□□□ 0.83
TRA2BP62995 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRA2BP62995 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRA2BP62995 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRA2BP62995 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRA2BP62995 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.25■□□□□ 0.83
TRA2BP62995 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.24■□□□□ 0.83
TRA2BP62995 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.24■□□□□ 0.83
TRA2BP62995 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRA2BP62995 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRA2BP62995 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRA2BP62995 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.24■□□□□ 0.83
TRA2BP62995 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRA2BP62995 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.24■□□□□ 0.83
TRA2BP62995 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRA2BP62995 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.24■□□□□ 0.83
TRA2BP62995 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRA2BP62995 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRA2BP62995 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.24■□□□□ 0.83
TRA2BP62995 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.24■□□□□ 0.83
TRA2BP62995 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.24■□□□□ 0.83
TRA2BP62995 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.23■□□□□ 0.83
TRA2BP62995 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRA2BP62995 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRA2BP62995 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRA2BP62995 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRA2BP62995 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.23■□□□□ 0.83
TRA2BP62995 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRA2BP62995 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRA2BP62995 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRA2BP62995 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.23■□□□□ 0.83
TRA2BP62995 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRA2BP62995 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRA2BP62995 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.22■□□□□ 0.83
TRA2BP62995 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRA2BP62995 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRA2BP62995 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRA2BP62995 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.22■□□□□ 0.83
TRA2BP62995 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.22■□□□□ 0.83
TRA2BP62995 AC142381.2-201ENST00000566120 298 ntBASIC20.22■□□□□ 0.83
TRA2BP62995 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRA2BP62995 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRA2BP62995 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRA2BP62995 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRA2BP62995 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.21■□□□□ 0.83
TRA2BP62995 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.21■□□□□ 0.83
TRA2BP62995 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRA2BP62995 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRA2BP62995 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRA2BP62995 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRA2BP62995 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TRA2BP62995 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRA2BP62995 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.21■□□□□ 0.83
TRA2BP62995 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRA2BP62995 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TRA2BP62995 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRA2BP62995 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.2■□□□□ 0.82
TRA2BP62995 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.2■□□□□ 0.82
TRA2BP62995 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRA2BP62995 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
TRA2BP62995 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRA2BP62995 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.2■□□□□ 0.82
TRA2BP62995 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRA2BP62995 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRA2BP62995 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.2■□□□□ 0.82
TRA2BP62995 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.2■□□□□ 0.82
TRA2BP62995 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRA2BP62995 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
TRA2BP62995 AC005837.3-201ENST00000612163 286 ntBASIC20.2■□□□□ 0.82
TRA2BP62995 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRA2BP62995 BX005040.4-201ENST00000637145 1518 ntBASIC20.2■□□□□ 0.82
TRA2BP62995 AC003102.1-202ENST00000563394 1796 ntBASIC20.2■□□□□ 0.82
TRA2BP62995 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.2■□□□□ 0.82
TRA2BP62995 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRA2BP62995 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.2■□□□□ 0.82
TRA2BP62995 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
TRA2BP62995 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.19■□□□□ 0.82
TRA2BP62995 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRA2BP62995 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRA2BP62995 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRA2BP62995 CLDN5-201ENST00000403084 2357 ntBASIC20.19■□□□□ 0.82
TRA2BP62995 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRA2BP62995 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.19■□□□□ 0.82
TRA2BP62995 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.19■□□□□ 0.82
TRA2BP62995 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRA2BP62995 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRA2BP62995 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRA2BP62995 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRA2BP62995 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRA2BP62995 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRA2BP62995 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRA2BP62995 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRA2BP62995 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRA2BP62995 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.18■□□□□ 0.82
TRA2BP62995 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.18■□□□□ 0.82
TRA2BP62995 AC012414.1-201ENST00000556676 535 ntBASIC20.18■□□□□ 0.82
TRA2BP62995 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.18■□□□□ 0.82
TRA2BP62995 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRA2BP62995 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms