Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.52■□□□□ 0.72
CDC42P60953 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42P60953 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42P60953 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42P60953 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42P60953 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42P60953 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDC42P60953 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.52■□□□□ 0.71
CDC42P60953 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CDC42P60953 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 AC009102.2-201ENST00000606772 1639 ntBASIC19.51■□□□□ 0.71
CDC42P60953 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
CDC42P60953 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.51■□□□□ 0.71
CDC42P60953 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.51■□□□□ 0.71
CDC42P60953 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CDC42P60953 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.51■□□□□ 0.71
CDC42P60953 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.51■□□□□ 0.71
CDC42P60953 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDC42P60953 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42P60953 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.51■□□□□ 0.71
CDC42P60953 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42P60953 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42P60953 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42P60953 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CDC42P60953 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42P60953 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42P60953 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.5■□□□□ 0.71
CDC42P60953 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42P60953 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.5■□□□□ 0.71
CDC42P60953 OXCT2P1-201ENST00000447263 1535 ntBASIC19.5■□□□□ 0.71
CDC42P60953 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDC42P60953 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42P60953 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.49■□□□□ 0.71
CDC42P60953 AL121603.2-201ENST00000557373 2117 ntBASIC19.49■□□□□ 0.71
CDC42P60953 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42P60953 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.49■□□□□ 0.71
CDC42P60953 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CDC42P60953 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42P60953 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDC42P60953 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42P60953 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42P60953 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42P60953 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.49■□□□□ 0.71
CDC42P60953 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.49■□□□□ 0.71
CDC42P60953 C17orf82-201ENST00000623772 1530 ntBASIC19.49■□□□□ 0.71
CDC42P60953 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42P60953 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CDC42P60953 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.49■□□□□ 0.71
CDC42P60953 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC42P60953 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CDC42P60953 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDC42P60953 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.48■□□□□ 0.71
CDC42P60953 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDC42P60953 YBX1P4-201ENST00000392794 808 ntBASIC19.48■□□□□ 0.71
CDC42P60953 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42P60953 AC103724.3-201ENST00000564481 992 ntBASIC19.48■□□□□ 0.71
CDC42P60953 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CDC42P60953 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC42P60953 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42P60953 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CDC42P60953 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDC42P60953 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42P60953 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42P60953 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDC42P60953 AC079089.2-201ENST00000531211 1277 ntBASIC19.47■□□□□ 0.71
CDC42P60953 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.47■□□□□ 0.71
CDC42P60953 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.47■□□□□ 0.71
CDC42P60953 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42P60953 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC42P60953 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.47■□□□□ 0.71
CDC42P60953 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42P60953 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDC42P60953 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDC42P60953 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42P60953 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42P60953 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms