Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP3S2P59780 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3S2P59780 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.35■□□□□ 0.53
AP3S2P59780 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.35■□□□□ 0.53
AP3S2P59780 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3S2P59780 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3S2P59780 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
AP3S2P59780 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP3S2P59780 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP3S2P59780 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S2P59780 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
AP3S2P59780 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
AP3S2P59780 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 SPCS2P3-201ENST00000500401 656 ntBASIC18.34■□□□□ 0.53
AP3S2P59780 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.34■□□□□ 0.53
AP3S2P59780 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S2P59780 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
AP3S2P59780 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.33■□□□□ 0.53
AP3S2P59780 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.33■□□□□ 0.53
AP3S2P59780 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S2P59780 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.33■□□□□ 0.53
AP3S2P59780 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S2P59780 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.33■□□□□ 0.53
AP3S2P59780 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S2P59780 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S2P59780 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
AP3S2P59780 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S2P59780 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S2P59780 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S2P59780 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S2P59780 ABHD17AP4-201ENST00000411545 909 ntBASIC18.33■□□□□ 0.52
AP3S2P59780 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.33■□□□□ 0.52
AP3S2P59780 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S2P59780 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
AP3S2P59780 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S2P59780 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S2P59780 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.32■□□□□ 0.52
AP3S2P59780 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
AP3S2P59780 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.32■□□□□ 0.52
AP3S2P59780 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
AP3S2P59780 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S2P59780 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3S2P59780 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
AP3S2P59780 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
AP3S2P59780 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
AP3S2P59780 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S2P59780 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3S2P59780 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3S2P59780 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S2P59780 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S2P59780 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP3S2P59780 AF131216.4-201ENST00000638924 1588 ntBASIC18.3■□□□□ 0.52
AP3S2P59780 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S2P59780 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
AP3S2P59780 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S2P59780 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S2P59780 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
AP3S2P59780 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S2P59780 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
AP3S2P59780 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
AP3S2P59780 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
AP3S2P59780 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S2P59780 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms