Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.66■□□□□ 0.9
EPHA4P54764 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.66■□□□□ 0.9
EPHA4P54764 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.66■□□□□ 0.9
EPHA4P54764 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 CLDN5-201ENST00000403084 2357 ntBASIC20.66■□□□□ 0.9
EPHA4P54764 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA4P54764 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
EPHA4P54764 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHA4P54764 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.65■□□□□ 0.9
EPHA4P54764 AC010141.2-201ENST00000452426 721 ntBASIC20.65■□□□□ 0.9
EPHA4P54764 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHA4P54764 KRT18P20-201ENST00000548986 1279 ntBASIC20.65■□□□□ 0.9
EPHA4P54764 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EPHA4P54764 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.65■□□□□ 0.9
EPHA4P54764 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
EPHA4P54764 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHA4P54764 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.65■□□□□ 0.9
EPHA4P54764 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.64■□□□□ 0.9
EPHA4P54764 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
EPHA4P54764 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.64■□□□□ 0.89
EPHA4P54764 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.64■□□□□ 0.89
EPHA4P54764 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EPHA4P54764 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.64■□□□□ 0.89
EPHA4P54764 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA4P54764 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.64■□□□□ 0.89
EPHA4P54764 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA4P54764 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA4P54764 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA4P54764 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA4P54764 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA4P54764 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA4P54764 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA4P54764 AC139530.1-201ENST00000575312 1977 ntBASIC20.63■□□□□ 0.89
EPHA4P54764 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA4P54764 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.63■□□□□ 0.89
EPHA4P54764 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
EPHA4P54764 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.63■□□□□ 0.89
EPHA4P54764 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.63■□□□□ 0.89
EPHA4P54764 EEF1DP3-203ENST00000566025 782 ntBASIC20.63■□□□□ 0.89
EPHA4P54764 MFSD11-216ENST00000590393 1141 ntBASIC20.63■□□□□ 0.89
EPHA4P54764 UBE2DNL-204ENST00000602536 740 ntBASIC20.63■□□□□ 0.89
EPHA4P54764 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA4P54764 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA4P54764 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.63■□□□□ 0.89
EPHA4P54764 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
EPHA4P54764 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.62■□□□□ 0.89
EPHA4P54764 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.62■□□□□ 0.89
EPHA4P54764 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
EPHA4P54764 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHA4P54764 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.62■□□□□ 0.89
EPHA4P54764 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.62■□□□□ 0.89
EPHA4P54764 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
EPHA4P54764 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHA4P54764 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.62■□□□□ 0.89
EPHA4P54764 AC053503.5-201ENST00000601508 636 ntBASIC20.62■□□□□ 0.89
EPHA4P54764 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.62■□□□□ 0.89
EPHA4P54764 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
EPHA4P54764 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHA4P54764 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.62■□□□□ 0.89
EPHA4P54764 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA4P54764 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA4P54764 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA4P54764 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA4P54764 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.61■□□□□ 0.89
EPHA4P54764 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA4P54764 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.61■□□□□ 0.89
EPHA4P54764 MYCNOS-205ENST00000641950 531 ntBASIC20.61■□□□□ 0.89
EPHA4P54764 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EPHA4P54764 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA4P54764 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
EPHA4P54764 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA4P54764 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA4P54764 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA4P54764 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA4P54764 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA4P54764 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHA4P54764 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA4P54764 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
EPHA4P54764 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.6■□□□□ 0.89
EPHA4P54764 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.6■□□□□ 0.89
EPHA4P54764 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA4P54764 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA4P54764 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms