Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.23■□□□□ 0.99
LIMK1P53667 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK1P53667 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.23■□□□□ 0.99
LIMK1P53667 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK1P53667 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK1P53667 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK1P53667 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK1P53667 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.23■□□□□ 0.99
LIMK1P53667 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.23■□□□□ 0.99
LIMK1P53667 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK1P53667 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.23■□□□□ 0.99
LIMK1P53667 AC092118.2-201ENST00000613495 667 ntBASIC21.23■□□□□ 0.99
LIMK1P53667 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.23■□□□□ 0.99
LIMK1P53667 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.23■□□□□ 0.99
LIMK1P53667 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.23■□□□□ 0.99
LIMK1P53667 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIMK1P53667 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK1P53667 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK1P53667 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LIMK1P53667 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK1P53667 KRT18P20-201ENST00000548986 1279 ntBASIC21.22■□□□□ 0.99
LIMK1P53667 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.22■□□□□ 0.99
LIMK1P53667 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.22■□□□□ 0.99
LIMK1P53667 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK1P53667 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK1P53667 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIMK1P53667 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LIMK1P53667 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 MKRN4P-201ENST00000444706 1521 ntBASIC21.21■□□□□ 0.99
LIMK1P53667 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.21■□□□□ 0.99
LIMK1P53667 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.21■□□□□ 0.99
LIMK1P53667 ESRRAP1-201ENST00000400596 1257 ntBASIC21.21■□□□□ 0.99
LIMK1P53667 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.21■□□□□ 0.99
LIMK1P53667 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.21■□□□□ 0.99
LIMK1P53667 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.21■□□□□ 0.99
LIMK1P53667 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.21■□□□□ 0.99
LIMK1P53667 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIMK1P53667 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
LIMK1P53667 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.2■□□□□ 0.99
LIMK1P53667 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.2■□□□□ 0.98
LIMK1P53667 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK1P53667 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK1P53667 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.2■□□□□ 0.98
LIMK1P53667 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LIMK1P53667 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK1P53667 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.2■□□□□ 0.98
LIMK1P53667 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.2■□□□□ 0.98
LIMK1P53667 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.2■□□□□ 0.98
LIMK1P53667 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK1P53667 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.2■□□□□ 0.98
LIMK1P53667 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LIMK1P53667 AC142381.4-202ENST00000563973 229 ntBASIC21.2■□□□□ 0.98
LIMK1P53667 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.2■□□□□ 0.98
LIMK1P53667 AC013268.1-206ENST00000638368 961 ntBASIC21.2■□□□□ 0.98
LIMK1P53667 AC112229.1-201ENST00000639295 961 ntBASIC21.2■□□□□ 0.98
LIMK1P53667 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK1P53667 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIMK1P53667 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LIMK1P53667 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.19■□□□□ 0.98
LIMK1P53667 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.19■□□□□ 0.98
LIMK1P53667 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.19■□□□□ 0.98
LIMK1P53667 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIMK1P53667 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK1P53667 AL158047.1-201ENST00000445918 881 ntBASIC21.18■□□□□ 0.98
LIMK1P53667 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.18■□□□□ 0.98
LIMK1P53667 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.18■□□□□ 0.98
LIMK1P53667 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIMK1P53667 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.18■□□□□ 0.98
LIMK1P53667 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.18■□□□□ 0.98
LIMK1P53667 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LIMK1P53667 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LIMK1P53667 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LIMK1P53667 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
LIMK1P53667 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LIMK1P53667 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK1P53667 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK1P53667 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
LIMK1P53667 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LIMK1P53667 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.17■□□□□ 0.98
LIMK1P53667 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK1P53667 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.17■□□□□ 0.98
LIMK1P53667 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.17■□□□□ 0.98
LIMK1P53667 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms