Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
LBX1P52954 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LBX1P52954 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LBX1P52954 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LBX1P52954 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
LBX1P52954 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LBX1P52954 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC24.69■■□□□ 1.54
LBX1P52954 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.68■■□□□ 1.54
LBX1P52954 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
LBX1P52954 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.68■■□□□ 1.54
LBX1P52954 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
LBX1P52954 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
LBX1P52954 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LBX1P52954 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LBX1P52954 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.68■■□□□ 1.54
LBX1P52954 DHDH-203ENST00000522614 776 ntTSL 5 BASIC24.68■■□□□ 1.54
LBX1P52954 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.68■■□□□ 1.54
LBX1P52954 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LBX1P52954 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LBX1P52954 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LBX1P52954 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.68■■□□□ 1.54
LBX1P52954 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.67■■□□□ 1.54
LBX1P52954 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.67■■□□□ 1.54
LBX1P52954 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.67■■□□□ 1.54
LBX1P52954 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.67■■□□□ 1.54
LBX1P52954 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.67■■□□□ 1.54
LBX1P52954 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
LBX1P52954 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
LBX1P52954 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
LBX1P52954 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LBX1P52954 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.66■■□□□ 1.54
LBX1P52954 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LBX1P52954 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LBX1P52954 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LBX1P52954 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LBX1P52954 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
LBX1P52954 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LBX1P52954 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
LBX1P52954 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.65■■□□□ 1.54
LBX1P52954 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.65■■□□□ 1.54
LBX1P52954 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.65■■□□□ 1.54
LBX1P52954 AC092803.2-201ENST00000564287 1899 ntBASIC24.65■■□□□ 1.54
LBX1P52954 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.65■■□□□ 1.54
LBX1P52954 MIR4785-201ENST00000585005 73 ntBASIC24.65■■□□□ 1.54
LBX1P52954 HLA-B-256ENST00000639848 1089 ntBASIC24.65■■□□□ 1.54
LBX1P52954 AL049637.2-201ENST00000641778 930 ntBASIC24.65■■□□□ 1.54
LBX1P52954 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LBX1P52954 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LBX1P52954 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.64■■□□□ 1.54
LBX1P52954 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.64■■□□□ 1.54
LBX1P52954 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
LBX1P52954 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LBX1P52954 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.64■■□□□ 1.54
LBX1P52954 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.64■■□□□ 1.54
LBX1P52954 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.64■■□□□ 1.54
LBX1P52954 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.64■■□□□ 1.54
LBX1P52954 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.64■■□□□ 1.53
LBX1P52954 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LBX1P52954 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LBX1P52954 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
LBX1P52954 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
LBX1P52954 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.63■■□□□ 1.53
LBX1P52954 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.63■■□□□ 1.53
LBX1P52954 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.63■■□□□ 1.53
LBX1P52954 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.63■■□□□ 1.53
LBX1P52954 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.63■■□□□ 1.53
LBX1P52954 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.63■■□□□ 1.53
LBX1P52954 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.63■■□□□ 1.53
LBX1P52954 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
LBX1P52954 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.63■■□□□ 1.53
LBX1P52954 DUSP8P5-201ENST00000422884 1815 ntBASIC24.63■■□□□ 1.53
LBX1P52954 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LBX1P52954 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.62■■□□□ 1.53
LBX1P52954 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LBX1P52954 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LBX1P52954 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LBX1P52954 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LBX1P52954 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LBX1P52954 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.62■■□□□ 1.53
LBX1P52954 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.62■■□□□ 1.53
LBX1P52954 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.62■■□□□ 1.53
LBX1P52954 AC069544.1-201ENST00000609399 999 ntBASIC24.62■■□□□ 1.53
LBX1P52954 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.62■■□□□ 1.53
LBX1P52954 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.62■■□□□ 1.53
LBX1P52954 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC24.61■■□□□ 1.53
LBX1P52954 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LBX1P52954 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LBX1P52954 TPM4P1-201ENST00000436100 807 ntBASIC24.61■■□□□ 1.53
LBX1P52954 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LBX1P52954 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.61■■□□□ 1.53
LBX1P52954 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.61■■□□□ 1.53
LBX1P52954 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms