Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.8■□□□□ 0.92
PDX1P52945 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDX1P52945 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDX1P52945 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDX1P52945 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDX1P52945 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.79■□□□□ 0.92
PDX1P52945 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
PDX1P52945 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDX1P52945 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
PDX1P52945 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDX1P52945 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDX1P52945 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDX1P52945 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDX1P52945 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDX1P52945 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.78■□□□□ 0.92
PDX1P52945 GPX1P1-201ENST00000388829 606 ntBASIC20.78■□□□□ 0.92
PDX1P52945 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDX1P52945 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.78■□□□□ 0.92
PDX1P52945 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDX1P52945 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.78■□□□□ 0.92
PDX1P52945 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDX1P52945 C1orf229-201ENST00000623686 2258 ntBASIC20.78■□□□□ 0.92
PDX1P52945 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDX1P52945 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDX1P52945 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.77■□□□□ 0.92
PDX1P52945 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PDX1P52945 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDX1P52945 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.77■□□□□ 0.92
PDX1P52945 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDX1P52945 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.77■□□□□ 0.92
PDX1P52945 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDX1P52945 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
PDX1P52945 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
PDX1P52945 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDX1P52945 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PDX1P52945 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDX1P52945 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDX1P52945 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.76■□□□□ 0.91
PDX1P52945 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDX1P52945 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.76■□□□□ 0.91
PDX1P52945 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDX1P52945 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PDX1P52945 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDX1P52945 UBE2DNL-204ENST00000602536 740 ntBASIC20.76■□□□□ 0.91
PDX1P52945 AC009237.3-201ENST00000393279 1427 ntBASIC20.76■□□□□ 0.91
PDX1P52945 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.75■□□□□ 0.91
PDX1P52945 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDX1P52945 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDX1P52945 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDX1P52945 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.75■□□□□ 0.91
PDX1P52945 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDX1P52945 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDX1P52945 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PDX1P52945 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.75■□□□□ 0.91
PDX1P52945 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
PDX1P52945 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PDX1P52945 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.74■□□□□ 0.91
PDX1P52945 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PDX1P52945 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDX1P52945 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
PDX1P52945 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PDX1P52945 GUSBP6-202ENST00000438529 1198 ntBASIC20.74■□□□□ 0.91
PDX1P52945 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.74■□□□□ 0.91
PDX1P52945 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.74■□□□□ 0.91
PDX1P52945 DUX4L16-201ENST00000555130 1264 ntBASIC20.74■□□□□ 0.91
PDX1P52945 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.74■□□□□ 0.91
PDX1P52945 AC142086.2-201ENST00000569753 217 ntBASIC20.74■□□□□ 0.91
PDX1P52945 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PDX1P52945 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDX1P52945 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDX1P52945 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDX1P52945 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDX1P52945 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDX1P52945 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.73■□□□□ 0.91
PDX1P52945 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDX1P52945 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDX1P52945 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDX1P52945 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PDX1P52945 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.73■□□□□ 0.91
PDX1P52945 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.73■□□□□ 0.91
PDX1P52945 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDX1P52945 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PDX1P52945 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.72■□□□□ 0.91
PDX1P52945 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.72■□□□□ 0.91
PDX1P52945 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.72■□□□□ 0.91
PDX1P52945 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PDX1P52945 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.72■□□□□ 0.91
PDX1P52945 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDX1P52945 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.72■□□□□ 0.91
PDX1P52945 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
PDX1P52945 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PDX1P52945 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms