Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 SLC7A5P1-201ENST00000568957 537 ntBASIC22.63■■□□□ 1.21
CLCN4P51793 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CLCN4P51793 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.63■■□□□ 1.21
CLCN4P51793 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CLCN4P51793 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CLCN4P51793 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
CLCN4P51793 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN4P51793 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.63■■□□□ 1.21
CLCN4P51793 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.63■■□□□ 1.21
CLCN4P51793 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN4P51793 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CLCN4P51793 LINC00526-201ENST00000581067 1875 ntBASIC22.62■■□□□ 1.21
CLCN4P51793 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN4P51793 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.62■■□□□ 1.21
CLCN4P51793 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.62■■□□□ 1.21
CLCN4P51793 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.62■■□□□ 1.21
CLCN4P51793 AC098934.4-201ENST00000564127 592 ntBASIC22.62■■□□□ 1.21
CLCN4P51793 EEF1DP3-203ENST00000566025 782 ntBASIC22.62■■□□□ 1.21
CLCN4P51793 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.62■■□□□ 1.21
CLCN4P51793 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.62■■□□□ 1.21
CLCN4P51793 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN4P51793 AC066615.1-201ENST00000640911 628 ntBASIC22.62■■□□□ 1.21
CLCN4P51793 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CLCN4P51793 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCN4P51793 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.62■■□□□ 1.21
CLCN4P51793 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.62■■□□□ 1.21
CLCN4P51793 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN4P51793 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN4P51793 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.61■■□□□ 1.21
CLCN4P51793 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN4P51793 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.61■■□□□ 1.21
CLCN4P51793 AL034346.1-201ENST00000568244 1277 ntBASIC22.61■■□□□ 1.21
CLCN4P51793 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CLCN4P51793 AC013268.1-206ENST00000638368 961 ntBASIC22.61■■□□□ 1.21
CLCN4P51793 AC112229.1-201ENST00000639295 961 ntBASIC22.61■■□□□ 1.21
CLCN4P51793 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN4P51793 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
CLCN4P51793 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.6■■□□□ 1.21
CLCN4P51793 TERF1P5-201ENST00000477545 1207 ntBASIC22.6■■□□□ 1.21
CLCN4P51793 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.6■■□□□ 1.21
CLCN4P51793 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CLCN4P51793 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CLCN4P51793 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN4P51793 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN4P51793 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN4P51793 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.6■■□□□ 1.21
CLCN4P51793 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.6■■□□□ 1.21
CLCN4P51793 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.6■■□□□ 1.21
CLCN4P51793 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN4P51793 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN4P51793 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.59■■□□□ 1.21
CLCN4P51793 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN4P51793 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CLCN4P51793 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.59■■□□□ 1.21
CLCN4P51793 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.59■■□□□ 1.21
CLCN4P51793 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.59■■□□□ 1.21
CLCN4P51793 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.59■■□□□ 1.21
CLCN4P51793 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN4P51793 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.59■■□□□ 1.21
CLCN4P51793 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN4P51793 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.58■■□□□ 1.21
CLCN4P51793 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN4P51793 AP006587.3-201ENST00000525742 1516 ntBASIC22.58■■□□□ 1.21
CLCN4P51793 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN4P51793 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN4P51793 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CLCN4P51793 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CLCN4P51793 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
CLCN4P51793 AC053503.5-201ENST00000601508 636 ntBASIC22.58■■□□□ 1.21
CLCN4P51793 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN4P51793 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN4P51793 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN4P51793 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN4P51793 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN4P51793 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN4P51793 AC068338.2-201ENST00000563278 1430 ntBASIC22.57■■□□□ 1.2
CLCN4P51793 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN4P51793 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.57■■□□□ 1.2
CLCN4P51793 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN4P51793 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.57■■□□□ 1.2
CLCN4P51793 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.57■■□□□ 1.2
CLCN4P51793 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.57■■□□□ 1.2
CLCN4P51793 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN4P51793 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.57■■□□□ 1.2
CLCN4P51793 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN4P51793 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN4P51793 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CLCN4P51793 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.57■■□□□ 1.2
CLCN4P51793 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN4P51793 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN4P51793 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN4P51793 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms