Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MECP2P51608 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MECP2P51608 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MECP2P51608 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.19■□□□□ 0.5
MECP2P51608 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.19■□□□□ 0.5
MECP2P51608 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MECP2P51608 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.19■□□□□ 0.5
MECP2P51608 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.18■□□□□ 0.5
MECP2P51608 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MECP2P51608 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MECP2P51608 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.18■□□□□ 0.5
MECP2P51608 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.18■□□□□ 0.5
MECP2P51608 AC022616.5-201ENST00000518796 181 ntBASIC18.18■□□□□ 0.5
MECP2P51608 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.18■□□□□ 0.5
MECP2P51608 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
MECP2P51608 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
MECP2P51608 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MECP2P51608 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MECP2P51608 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MECP2P51608 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.17■□□□□ 0.5
MECP2P51608 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MECP2P51608 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.17■□□□□ 0.5
MECP2P51608 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
MECP2P51608 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.17■□□□□ 0.5
MECP2P51608 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MECP2P51608 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MECP2P51608 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
MECP2P51608 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MECP2P51608 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
MECP2P51608 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MECP2P51608 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MECP2P51608 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
MECP2P51608 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
MECP2P51608 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.16■□□□□ 0.5
MECP2P51608 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.16■□□□□ 0.5
MECP2P51608 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.16■□□□□ 0.5
MECP2P51608 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MECP2P51608 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MECP2P51608 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MECP2P51608 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.16■□□□□ 0.5
MECP2P51608 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MECP2P51608 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
MECP2P51608 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MECP2P51608 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.15■□□□□ 0.5
MECP2P51608 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.15■□□□□ 0.5
MECP2P51608 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.15■□□□□ 0.5
MECP2P51608 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
MECP2P51608 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.15■□□□□ 0.5
MECP2P51608 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.15■□□□□ 0.5
MECP2P51608 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MECP2P51608 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MECP2P51608 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MECP2P51608 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MECP2P51608 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms