Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB28P51157 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.72■□□□□ 0.91
RAB28P51157 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB28P51157 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB28P51157 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB28P51157 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB28P51157 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB28P51157 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB28P51157 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB28P51157 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB28P51157 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB28P51157 AC079140.4-201ENST00000507448 529 ntBASIC20.71■□□□□ 0.91
RAB28P51157 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RAB28P51157 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB28P51157 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB28P51157 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB28P51157 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB28P51157 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB28P51157 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RAB28P51157 FAM99A-202ENST00000538190 1989 ntBASIC20.7■□□□□ 0.9
RAB28P51157 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB28P51157 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB28P51157 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB28P51157 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB28P51157 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB28P51157 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB28P51157 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB28P51157 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB28P51157 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.69■□□□□ 0.9
RAB28P51157 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB28P51157 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.69■□□□□ 0.9
RAB28P51157 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAB28P51157 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB28P51157 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAB28P51157 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB28P51157 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB28P51157 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB28P51157 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB28P51157 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB28P51157 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB28P51157 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB28P51157 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB28P51157 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.68■□□□□ 0.9
RAB28P51157 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB28P51157 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
RAB28P51157 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB28P51157 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB28P51157 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RAB28P51157 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB28P51157 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
RAB28P51157 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.67■□□□□ 0.9
RAB28P51157 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB28P51157 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAB28P51157 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.67■□□□□ 0.9
RAB28P51157 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB28P51157 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB28P51157 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB28P51157 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB28P51157 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RAB28P51157 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.67■□□□□ 0.9
RAB28P51157 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.66■□□□□ 0.9
RAB28P51157 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 KRT87P-202ENST00000534226 1464 ntBASIC20.66■□□□□ 0.9
RAB28P51157 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB28P51157 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB28P51157 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB28P51157 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 C11orf96-202ENST00000528572 1834 ntBASIC20.65■□□□□ 0.9
RAB28P51157 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB28P51157 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms