Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD97P48960 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CD97P48960 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD97P48960 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD97P48960 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD97P48960 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.41■□□□□ 0.86
CD97P48960 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD97P48960 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.4■□□□□ 0.86
CD97P48960 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CD97P48960 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.4■□□□□ 0.86
CD97P48960 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CD97P48960 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 GUSBP5-202ENST00000510805 1989 ntBASIC20.4■□□□□ 0.86
CD97P48960 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.4■□□□□ 0.86
CD97P48960 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.4■□□□□ 0.86
CD97P48960 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.4■□□□□ 0.86
CD97P48960 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD97P48960 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD97P48960 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.39■□□□□ 0.86
CD97P48960 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD97P48960 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CD97P48960 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD97P48960 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD97P48960 LINC02228-203ENST00000641970 1355 ntBASIC20.39■□□□□ 0.85
CD97P48960 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD97P48960 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD97P48960 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.39■□□□□ 0.85
CD97P48960 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.39■□□□□ 0.85
CD97P48960 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD97P48960 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD97P48960 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.39■□□□□ 0.85
CD97P48960 DUX4L4-201ENST00000566884 1269 ntBASIC20.39■□□□□ 0.85
CD97P48960 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD97P48960 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CD97P48960 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.38■□□□□ 0.85
CD97P48960 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
CD97P48960 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CD97P48960 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CD97P48960 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.38■□□□□ 0.85
CD97P48960 RAP2CP1-201ENST00000605103 478 ntBASIC20.38■□□□□ 0.85
CD97P48960 AC080038.1-201ENST00000611274 1154 ntBASIC20.38■□□□□ 0.85
CD97P48960 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.38■□□□□ 0.85
CD97P48960 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.38■□□□□ 0.85
CD97P48960 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.38■□□□□ 0.85
CD97P48960 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD97P48960 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD97P48960 FP325331.1-202ENST00000623531 1380 ntBASIC20.37■□□□□ 0.85
CD97P48960 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD97P48960 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.37■□□□□ 0.85
CD97P48960 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.37■□□□□ 0.85
CD97P48960 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD97P48960 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.37■□□□□ 0.85
CD97P48960 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD97P48960 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD97P48960 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD97P48960 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CD97P48960 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.36■□□□□ 0.85
CD97P48960 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.36■□□□□ 0.85
CD97P48960 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CD97P48960 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CD97P48960 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.36■□□□□ 0.85
CD97P48960 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD97P48960 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CD97P48960 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD97P48960 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD97P48960 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD97P48960 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms