Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YGR015CYGR015C 987 nt2.29□□□□□ -2.04
RPB11P38902 YGR017WYGR017W 894 nt2.29□□□□□ -2.04
RPB11P38902 RPS22AYJL190C 393 nt2.29□□□□□ -2.04
RPB11P38902 YJR056CYJR056C 711 nt2.29□□□□□ -2.04
RPB11P38902 IME1YJR094C 1083 nt2.29□□□□□ -2.04
RPB11P38902 NDL1YLR254C 570 nt2.29□□□□□ -2.04
RPB11P38902 MCM16YPR046W 546 nt2.29□□□□□ -2.04
RPB11P38902 PHO88YBR106W 567 nt2.29□□□□□ -2.04
RPB11P38902 BNR1YIL159W 4128 nt2.28□□□□□ -2.04
RPB11P38902 EXO84YBR102C 2262 nt2.28□□□□□ -2.04
RPB11P38902 RPN5YDL147W 1338 nt2.28□□□□□ -2.04
RPB11P38902 YCR101CYCR101C 549 nt2.28□□□□□ -2.04
RPB11P38902 RPS29BYDL061C 171 nt2.28□□□□□ -2.04
RPB11P38902 SPT2YER161C 1002 nt2.28□□□□□ -2.04
RPB11P38902 CDC26YFR036W 375 nt2.28□□□□□ -2.04
RPB11P38902 SYS1YJL004C 612 nt2.28□□□□□ -2.04
RPB11P38902 GCD14YJL125C 1152 nt2.28□□□□□ -2.04
RPB11P38902 YKR033CYKR033C 426 nt2.28□□□□□ -2.04
RPB11P38902 YBL029WYBL029W 1131 nt2.28□□□□□ -2.04
RPB11P38902 RPL20AYMR242C 519 nt2.28□□□□□ -2.04
RPB11P38902 OXR1YPL196W 822 nt2.28□□□□□ -2.04
RPB11P38902 PRM2YIL037C 1971 nt2.28□□□□□ -2.04
RPB11P38902 YLR001CYLR001C 2589 nt2.28□□□□□ -2.04
RPB11P38902 ALG8YOR067C 1734 nt2.28□□□□□ -2.05
RPB11P38902 CDC55YGL190C 1581 nt2.27□□□□□ -2.05
RPB11P38902 SAD1YFR005C 1347 nt2.27□□□□□ -2.05
RPB11P38902 YCR045W-AYCR045W-A 351 nt2.27□□□□□ -2.05
RPB11P38902 GPP2YER062C 753 nt2.27□□□□□ -2.05
RPB11P38902 ERG26YGL001C 1050 nt2.27□□□□□ -2.05
RPB11P38902 YGR160WYGR160W 612 nt2.27□□□□□ -2.05
RPB11P38902 YKR011CYKR011C 1062 nt2.27□□□□□ -2.05
RPB11P38902 GMH1YKR030W 822 nt2.27□□□□□ -2.05
RPB11P38902 GLO1YML004C 981 nt2.27□□□□□ -2.05
RPB11P38902 MRPL16YBL038W 699 nt2.27□□□□□ -2.05
RPB11P38902 HHF1YBR009C 312 nt2.27□□□□□ -2.05
RPB11P38902 CIK1YMR198W 1785 nt2.27□□□□□ -2.05
RPB11P38902 RGC1YPR115W 3252 nt2.27□□□□□ -2.05
RPB11P38902 YIL169CYIL169C 2988 nt2.27□□□□□ -2.05
RPB11P38902 YVC1YOR087W 2028 nt2.27□□□□□ -2.05
RPB11P38902 DBP5YOR046C 1449 nt2.26□□□□□ -2.05
RPB11P38902 SRO77YBL106C 3033 nt2.26□□□□□ -2.05
RPB11P38902 FLO11YIR019C 4104 nt2.26□□□□□ -2.05
RPB11P38902 DSN1YIR010W 1731 nt2.26□□□□□ -2.05
RPB11P38902 KIN3YAR018C 1308 nt2.26□□□□□ -2.05
RPB11P38902 OPI6YDL096C 327 nt2.26□□□□□ -2.05
RPB11P38902 SPO74YGL170C 1242 nt2.26□□□□□ -2.05
RPB11P38902 PBA1YLR199C 831 nt2.26□□□□□ -2.05
RPB11P38902 YLR326WYLR326W 723 nt2.26□□□□□ -2.05
RPB11P38902 INO4YOL108C 456 nt2.26□□□□□ -2.05
RPB11P38902 CYC2YOR037W 1101 nt2.26□□□□□ -2.05
RPB11P38902 RPA43YOR340C 981 nt2.26□□□□□ -2.05
RPB11P38902 RPL33AYPL143W 324 nt2.26□□□□□ -2.05
RPB11P38902 YBR085C-AYBR085C-A 258 nt2.26□□□□□ -2.05
RPB11P38902 YIL082W-AYIL082W-A 4497 nt2.26□□□□□ -2.05
RPB11P38902 SEC27YGL137W 2670 nt2.26□□□□□ -2.05
RPB11P38902 REG1YDR028C 3045 nt2.26□□□□□ -2.05
RPB11P38902 VAC14YLR386W 2643 nt2.26□□□□□ -2.05
RPB11P38902 HFD1YMR110C 1599 nt2.26□□□□□ -2.05
RPB11P38902 BUD30YDL151C 582 nt2.25□□□□□ -2.05
RPB11P38902 HPA3YEL066W 540 nt2.25□□□□□ -2.05
RPB11P38902 AST2YER101C 1293 nt2.25□□□□□ -2.05
RPB11P38902 COX18YGR062C 951 nt2.25□□□□□ -2.05
RPB11P38902 MRPS35YGR165W 1038 nt2.25□□□□□ -2.05
RPB11P38902 YBL039W-BYBL039W-B 180 nt2.25□□□□□ -2.05
RPB11P38902 ATG29YPL166W 642 nt2.25□□□□□ -2.05
RPB11P38902 snR42snR42 351 nt2.25□□□□□ -2.05
RPB11P38902 AEP2YMR282C 1743 nt2.25□□□□□ -2.05
RPB11P38902 SMC2YFR031C 3513 nt2.25□□□□□ -2.05
RPB11P38902 PHO81YGR233C 3537 nt2.25□□□□□ -2.05
RPB11P38902 MET6YER091C 2304 nt2.24□□□□□ -2.05
RPB11P38902 RPL14BYHL001W 417 nt2.24□□□□□ -2.05
RPB11P38902 AIM39YOL053W 1188 nt2.24□□□□□ -2.05
RPB11P38902 YPR053CYPR053C 456 nt2.24□□□□□ -2.05
RPB11P38902 YDR034C-DYDR034C-D 5313 nt2.24□□□□□ -2.05
RPB11P38902 YDR210W-BYDR210W-B 5313 nt2.24□□□□□ -2.05
RPB11P38902 YLR410W-BYLR410W-B 5313 nt2.24□□□□□ -2.05
RPB11P38902 CAF120YNL278W 3183 nt2.24□□□□□ -2.05
RPB11P38902 RIX1YHR197W 2292 nt2.24□□□□□ -2.05
RPB11P38902 GEA1YJR031C 4227 nt2.24□□□□□ -2.05
RPB11P38902 SIR1YKR101W 1965 nt2.23□□□□□ -2.05
RPB11P38902 SOK1YDR006C 2706 nt2.23□□□□□ -2.05
RPB11P38902 BSC1YDL037C 987 nt2.23□□□□□ -2.05
RPB11P38902 TGL2YDR058C 981 nt2.23□□□□□ -2.05
RPB11P38902 ATG27YJL178C 816 nt2.23□□□□□ -2.05
RPB11P38902 MTR2YKL186C 555 nt2.23□□□□□ -2.05
RPB11P38902 MRPL33YMR286W 261 nt2.23□□□□□ -2.05
RPB11P38902 YNL143CYNL143C 393 nt2.23□□□□□ -2.05
RPB11P38902 ISA2YPR067W 558 nt2.23□□□□□ -2.05
RPB11P38902 VPS3YDR495C 3036 nt2.23□□□□□ -2.05
RPB11P38902 CHS3YBR023C 3498 nt2.23□□□□□ -2.05
RPB11P38902 YKR078WYKR078W 1758 nt2.23□□□□□ -2.05
RPB11P38902 ILS1YBL076C 3219 nt2.23□□□□□ -2.05
RPB11P38902 RTK1YDL025C 1863 nt2.22□□□□□ -2.05
RPB11P38902 AXL1YPR122W 3627 nt2.22□□□□□ -2.05
RPB11P38902 DIA2YOR080W 2199 nt2.22□□□□□ -2.05
RPB11P38902 SRP68YPL243W 1800 nt2.22□□□□□ -2.05
RPB11P38902 CIN1YOR349W 3045 nt2.22□□□□□ -2.05
RPB11P38902 RTT10YPL183C 3042 nt2.22□□□□□ -2.05
RPB11P38902 MRD1YPR112C 2664 nt2.22□□□□□ -2.05
RPB11P38902 KXD1YGL079W 657 nt2.22□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms