Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RHEB-204ENST00000472642 900 ntTSL 3 BASIC27.18■■□□□ 1.94
RFC4P35249 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.18■■□□□ 1.94
RFC4P35249 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC27.18■■□□□ 1.94
RFC4P35249 AC053503.5-201ENST00000601508 636 ntBASIC27.18■■□□□ 1.94
RFC4P35249 LINC01960-201ENST00000563759 1884 ntBASIC27.18■■□□□ 1.94
RFC4P35249 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RFC4P35249 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.17■■□□□ 1.94
RFC4P35249 IRX5-204ENST00000560154 879 ntTSL 5 BASIC27.17■■□□□ 1.94
RFC4P35249 AC083880.1-201ENST00000608266 535 ntBASIC27.17■■□□□ 1.94
RFC4P35249 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RFC4P35249 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
RFC4P35249 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RFC4P35249 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.16■■□□□ 1.94
RFC4P35249 ESRRAP1-201ENST00000400596 1257 ntBASIC27.16■■□□□ 1.94
RFC4P35249 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC27.16■■□□□ 1.94
RFC4P35249 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC27.16■■□□□ 1.94
RFC4P35249 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.16■■□□□ 1.94
RFC4P35249 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFC4P35249 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFC4P35249 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFC4P35249 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.16■■□□□ 1.94
RFC4P35249 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFC4P35249 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
RFC4P35249 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RFC4P35249 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RFC4P35249 AC097658.1-201ENST00000475555 843 ntBASIC27.15■■□□□ 1.94
RFC4P35249 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.15■■□□□ 1.94
RFC4P35249 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
RFC4P35249 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
RFC4P35249 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.15■■□□□ 1.94
RFC4P35249 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.15■■□□□ 1.94
RFC4P35249 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
RFC4P35249 OR7E47P-201ENST00000546390 1422 ntBASIC27.15■■□□□ 1.94
RFC4P35249 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.14■■□□□ 1.94
RFC4P35249 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RFC4P35249 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RFC4P35249 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RFC4P35249 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC27.14■■□□□ 1.94
RFC4P35249 GCSHP5-201ENST00000443090 522 ntBASIC27.14■■□□□ 1.94
RFC4P35249 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC27.14■■□□□ 1.94
RFC4P35249 ADM-205ENST00000528544 586 ntTSL 2 BASIC27.14■■□□□ 1.94
RFC4P35249 AL034346.1-201ENST00000568244 1277 ntBASIC27.14■■□□□ 1.94
RFC4P35249 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
RFC4P35249 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RFC4P35249 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.13■■□□□ 1.93
RFC4P35249 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RFC4P35249 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RFC4P35249 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
RFC4P35249 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC27.13■■□□□ 1.93
RFC4P35249 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC27.13■■□□□ 1.93
RFC4P35249 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.13■■□□□ 1.93
RFC4P35249 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC27.13■■□□□ 1.93
RFC4P35249 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC27.13■■□□□ 1.93
RFC4P35249 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC27.13■■□□□ 1.93
RFC4P35249 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RFC4P35249 MYC-209ENST00000641252 345 ntBASIC27.13■■□□□ 1.93
RFC4P35249 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
RFC4P35249 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC27.13■■□□□ 1.93
RFC4P35249 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RFC4P35249 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.12■■□□□ 1.93
RFC4P35249 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RFC4P35249 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.12■■□□□ 1.93
RFC4P35249 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RFC4P35249 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RFC4P35249 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RFC4P35249 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC27.12■■□□□ 1.93
RFC4P35249 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC27.12■■□□□ 1.93
RFC4P35249 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RFC4P35249 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RFC4P35249 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
RFC4P35249 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
RFC4P35249 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RFC4P35249 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.11■■□□□ 1.93
RFC4P35249 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RFC4P35249 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RFC4P35249 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC27.11■■□□□ 1.93
RFC4P35249 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.11■■□□□ 1.93
RFC4P35249 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RFC4P35249 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
RFC4P35249 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RFC4P35249 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RFC4P35249 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
RFC4P35249 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC27.1■■□□□ 1.93
RFC4P35249 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
RFC4P35249 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC27.1■■□□□ 1.93
RFC4P35249 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.1■■□□□ 1.93
RFC4P35249 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
RFC4P35249 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RFC4P35249 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RFC4P35249 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RFC4P35249 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RFC4P35249 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC27.09■■□□□ 1.93
RFC4P35249 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC27.09■■□□□ 1.93
RFC4P35249 BET1L-207ENST00000529614 560 ntTSL 5 BASIC27.09■■□□□ 1.93
RFC4P35249 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC27.09■■□□□ 1.93
RFC4P35249 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.09■■□□□ 1.93
RFC4P35249 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC27.09■■□□□ 1.93
RFC4P35249 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RFC4P35249 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RFC4P35249 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms