Protein–RNA interactions for Protein: P27797

CALR, Calreticulin, humanhuman

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALRP27797 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALRP27797 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CALRP27797 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CALRP27797 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALRP27797 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALRP27797 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALRP27797 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALRP27797 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALRP27797 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.36■□□□□ 0.85
CALRP27797 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALRP27797 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CALRP27797 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALRP27797 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CALRP27797 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALRP27797 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALRP27797 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.35■□□□□ 0.85
CALRP27797 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALRP27797 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALRP27797 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
CALRP27797 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALRP27797 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
CALRP27797 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CALRP27797 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALRP27797 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CALRP27797 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.34■□□□□ 0.85
CALRP27797 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CALRP27797 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.34■□□□□ 0.85
CALRP27797 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.34■□□□□ 0.85
CALRP27797 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CALRP27797 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.34■□□□□ 0.85
CALRP27797 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALRP27797 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CALRP27797 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CALRP27797 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CALRP27797 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.33■□□□□ 0.85
CALRP27797 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CALRP27797 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CALRP27797 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CALRP27797 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CALRP27797 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CALRP27797 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CALRP27797 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CALRP27797 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALRP27797 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CALRP27797 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CALRP27797 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALRP27797 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CALRP27797 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALRP27797 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALRP27797 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CALRP27797 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.33■□□□□ 0.84
CALRP27797 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALRP27797 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALRP27797 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALRP27797 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CALRP27797 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.32■□□□□ 0.84
CALRP27797 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.32■□□□□ 0.84
CALRP27797 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CALRP27797 BX323043.1-201ENST00000641006 1765 ntBASIC20.32■□□□□ 0.84
CALRP27797 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.32■□□□□ 0.84
CALRP27797 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.32■□□□□ 0.84
CALRP27797 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.32■□□□□ 0.84
CALRP27797 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALRP27797 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CALRP27797 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CALRP27797 PKD1P1-201ENST00000458669 6805 ntBASIC20.31■□□□□ 0.84
CALRP27797 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALRP27797 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALRP27797 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.31■□□□□ 0.84
CALRP27797 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CALRP27797 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CALRP27797 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALRP27797 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALRP27797 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.31■□□□□ 0.84
CALRP27797 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.31■□□□□ 0.84
CALRP27797 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.31■□□□□ 0.84
CALRP27797 AC018445.3-201ENST00000624177 1945 ntBASIC20.31■□□□□ 0.84
CALRP27797 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALRP27797 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms