Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP24386 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP24386 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP24386 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP24386 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP24386 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP24386 AC105265.2-201ENST00000467189 838 ntBASIC19.94■□□□□ 0.78
CHMP24386 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP24386 AC126544.1-201ENST00000580842 1059 ntBASIC19.94■□□□□ 0.78
CHMP24386 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP24386 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CHMP24386 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP24386 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP24386 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP24386 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHMP24386 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP24386 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP24386 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP24386 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHMP24386 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP24386 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP24386 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP24386 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP24386 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHMP24386 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP24386 AC005229.4-201ENST00000610085 2198 ntBASIC19.93■□□□□ 0.78
CHMP24386 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP24386 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHMP24386 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP24386 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP24386 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.92■□□□□ 0.78
CHMP24386 ZNRF2P3-201ENST00000424200 374 ntBASIC19.92■□□□□ 0.78
CHMP24386 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHMP24386 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP24386 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP24386 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHMP24386 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP24386 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP24386 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP24386 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP24386 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP24386 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP24386 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHMP24386 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP24386 AC004687.1-201ENST00000579003 1625 ntBASIC19.91■□□□□ 0.78
CHMP24386 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP24386 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHMP24386 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP24386 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP24386 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 AP005435.1-201ENST00000529293 1178 ntBASIC19.9■□□□□ 0.78
CHMP24386 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHMP24386 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHMP24386 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP24386 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP24386 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP24386 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP24386 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP24386 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP24386 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP24386 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CHMP24386 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CHMP24386 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CHMP24386 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP24386 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP24386 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.89■□□□□ 0.77
CHMP24386 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP24386 AC010525.1-201ENST00000585559 441 ntBASIC19.89■□□□□ 0.77
CHMP24386 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CHMP24386 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.89■□□□□ 0.77
CHMP24386 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP24386 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP24386 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP24386 AC244015.2-201ENST00000616358 1861 ntBASIC19.88■□□□□ 0.77
CHMP24386 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CHMP24386 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP24386 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP24386 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP24386 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CHMP24386 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms