Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BCKDHAP12694 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BCKDHAP12694 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.45■□□□□ 0.86
BCKDHAP12694 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BCKDHAP12694 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.45■□□□□ 0.86
BCKDHAP12694 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BCKDHAP12694 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
BCKDHAP12694 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.44■□□□□ 0.86
BCKDHAP12694 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 AF106564.1-201ENST00000607058 2553 ntBASIC20.44■□□□□ 0.86
BCKDHAP12694 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BCKDHAP12694 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.44■□□□□ 0.86
BCKDHAP12694 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.44■□□□□ 0.86
BCKDHAP12694 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
BCKDHAP12694 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BCKDHAP12694 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
BCKDHAP12694 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BCKDHAP12694 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
BCKDHAP12694 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BCKDHAP12694 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BCKDHAP12694 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.43■□□□□ 0.86
BCKDHAP12694 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
BCKDHAP12694 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.43■□□□□ 0.86
BCKDHAP12694 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BCKDHAP12694 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
BCKDHAP12694 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BCKDHAP12694 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BCKDHAP12694 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.42■□□□□ 0.86
BCKDHAP12694 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
BCKDHAP12694 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BCKDHAP12694 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.42■□□□□ 0.86
BCKDHAP12694 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.42■□□□□ 0.86
BCKDHAP12694 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BCKDHAP12694 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BCKDHAP12694 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
BCKDHAP12694 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BCKDHAP12694 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BCKDHAP12694 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.41■□□□□ 0.86
BCKDHAP12694 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
BCKDHAP12694 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BCKDHAP12694 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BCKDHAP12694 AL034346.1-201ENST00000568244 1277 ntBASIC20.41■□□□□ 0.86
BCKDHAP12694 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
BCKDHAP12694 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.41■□□□□ 0.86
BCKDHAP12694 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BCKDHAP12694 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BCKDHAP12694 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BCKDHAP12694 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.41■□□□□ 0.86
BCKDHAP12694 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
BCKDHAP12694 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
BCKDHAP12694 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.4■□□□□ 0.86
BCKDHAP12694 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.4■□□□□ 0.86
BCKDHAP12694 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BCKDHAP12694 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.4■□□□□ 0.86
BCKDHAP12694 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.4■□□□□ 0.86
BCKDHAP12694 AP004607.7-201ENST00000527152 1677 ntBASIC20.4■□□□□ 0.86
BCKDHAP12694 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.4■□□□□ 0.86
BCKDHAP12694 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.4■□□□□ 0.86
BCKDHAP12694 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
BCKDHAP12694 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BCKDHAP12694 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
BCKDHAP12694 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCKDHAP12694 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
BCKDHAP12694 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.39■□□□□ 0.85
BCKDHAP12694 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCKDHAP12694 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCKDHAP12694 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BCKDHAP12694 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BCKDHAP12694 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.39■□□□□ 0.85
BCKDHAP12694 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BCKDHAP12694 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.39■□□□□ 0.85
BCKDHAP12694 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.39■□□□□ 0.85
BCKDHAP12694 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.39■□□□□ 0.85
BCKDHAP12694 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.39■□□□□ 0.85
BCKDHAP12694 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCKDHAP12694 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.38■□□□□ 0.85
BCKDHAP12694 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
BCKDHAP12694 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.38■□□□□ 0.85
BCKDHAP12694 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.38■□□□□ 0.85
BCKDHAP12694 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.38■□□□□ 0.85
BCKDHAP12694 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCKDHAP12694 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.38■□□□□ 0.85
BCKDHAP12694 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms