Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
SNRPA1P09661 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC27.46■■□□□ 1.99
SNRPA1P09661 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.46■■□□□ 1.99
SNRPA1P09661 AC010536.3-201ENST00000620306 533 ntBASIC27.46■■□□□ 1.99
SNRPA1P09661 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.46■■□□□ 1.99
SNRPA1P09661 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.46■■□□□ 1.99
SNRPA1P09661 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.46■■□□□ 1.99
SNRPA1P09661 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
SNRPA1P09661 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.46■■□□□ 1.99
SNRPA1P09661 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
SNRPA1P09661 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.45■■□□□ 1.99
SNRPA1P09661 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.45■■□□□ 1.99
SNRPA1P09661 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
SNRPA1P09661 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SNRPA1P09661 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SNRPA1P09661 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SNRPA1P09661 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.45■■□□□ 1.98
SNRPA1P09661 SLC7A5P1-201ENST00000568957 537 ntBASIC27.45■■□□□ 1.98
SNRPA1P09661 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.45■■□□□ 1.98
SNRPA1P09661 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SNRPA1P09661 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SNRPA1P09661 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
SNRPA1P09661 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.44■■□□□ 1.98
SNRPA1P09661 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNRPA1P09661 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.44■■□□□ 1.98
SNRPA1P09661 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.44■■□□□ 1.98
SNRPA1P09661 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNRPA1P09661 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC27.43■■□□□ 1.98
SNRPA1P09661 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.43■■□□□ 1.98
SNRPA1P09661 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.43■■□□□ 1.98
SNRPA1P09661 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNRPA1P09661 TSPY6P-201ENST00000448518 926 ntBASIC27.43■■□□□ 1.98
SNRPA1P09661 SLC7A5P2-201ENST00000553010 536 ntBASIC27.43■■□□□ 1.98
SNRPA1P09661 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC27.43■■□□□ 1.98
SNRPA1P09661 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.43■■□□□ 1.98
SNRPA1P09661 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
SNRPA1P09661 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.43■■□□□ 1.98
SNRPA1P09661 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNRPA1P09661 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNRPA1P09661 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.43■■□□□ 1.98
SNRPA1P09661 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.42■■□□□ 1.98
SNRPA1P09661 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNRPA1P09661 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNRPA1P09661 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC27.42■■□□□ 1.98
SNRPA1P09661 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNRPA1P09661 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNRPA1P09661 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNRPA1P09661 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNRPA1P09661 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNRPA1P09661 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.42■■□□□ 1.98
SNRPA1P09661 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.42■■□□□ 1.98
SNRPA1P09661 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.42■■□□□ 1.98
SNRPA1P09661 AC142086.2-201ENST00000569753 217 ntBASIC27.42■■□□□ 1.98
SNRPA1P09661 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNRPA1P09661 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNRPA1P09661 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.41■■□□□ 1.98
SNRPA1P09661 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.41■■□□□ 1.98
SNRPA1P09661 GUSBP6-202ENST00000438529 1198 ntBASIC27.41■■□□□ 1.98
SNRPA1P09661 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.41■■□□□ 1.98
SNRPA1P09661 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNRPA1P09661 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.41■■□□□ 1.98
SNRPA1P09661 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNRPA1P09661 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNRPA1P09661 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
SNRPA1P09661 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC27.4■■□□□ 1.98
SNRPA1P09661 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC27.4■■□□□ 1.98
SNRPA1P09661 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
SNRPA1P09661 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNRPA1P09661 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNRPA1P09661 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.4■■□□□ 1.98
SNRPA1P09661 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27.4■■□□□ 1.98
SNRPA1P09661 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC27.4■■□□□ 1.98
SNRPA1P09661 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
SNRPA1P09661 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNRPA1P09661 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.39■■□□□ 1.98
SNRPA1P09661 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.39■■□□□ 1.98
SNRPA1P09661 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNRPA1P09661 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNRPA1P09661 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.39■■□□□ 1.98
SNRPA1P09661 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.39■■□□□ 1.98
SNRPA1P09661 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNRPA1P09661 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNRPA1P09661 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC27.39■■□□□ 1.98
SNRPA1P09661 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
SNRPA1P09661 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNRPA1P09661 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.38■■□□□ 1.97
SNRPA1P09661 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNRPA1P09661 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNRPA1P09661 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNRPA1P09661 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
SNRPA1P09661 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.38■■□□□ 1.97
SNRPA1P09661 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC27.38■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms