Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CSF1P09603 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.42■□□□□ 0.54
CSF1P09603 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSF1P09603 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.42■□□□□ 0.54
CSF1P09603 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSF1P09603 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.42■□□□□ 0.54
CSF1P09603 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.42■□□□□ 0.54
CSF1P09603 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSF1P09603 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.42■□□□□ 0.54
CSF1P09603 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.42■□□□□ 0.54
CSF1P09603 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.42■□□□□ 0.54
CSF1P09603 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CSF1P09603 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSF1P09603 AF131216.4-201ENST00000638924 1588 ntBASIC18.42■□□□□ 0.54
CSF1P09603 FP325331.1-202ENST00000623531 1380 ntBASIC18.42■□□□□ 0.54
CSF1P09603 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.41■□□□□ 0.54
CSF1P09603 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CSF1P09603 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.41■□□□□ 0.54
CSF1P09603 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CSF1P09603 AL136116.3-201ENST00000402907 1138 ntBASIC18.41■□□□□ 0.54
CSF1P09603 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.41■□□□□ 0.54
CSF1P09603 CA15P2-201ENST00000611168 834 ntBASIC18.41■□□□□ 0.54
CSF1P09603 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSF1P09603 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.4■□□□□ 0.54
CSF1P09603 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.4■□□□□ 0.54
CSF1P09603 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CSF1P09603 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.4■□□□□ 0.54
CSF1P09603 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.4■□□□□ 0.54
CSF1P09603 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.4■□□□□ 0.54
CSF1P09603 AC131281.2-201ENST00000520478 145 ntBASIC18.4■□□□□ 0.54
CSF1P09603 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CSF1P09603 MTDHP2-201ENST00000601468 714 ntBASIC18.4■□□□□ 0.54
CSF1P09603 AC010997.5-201ENST00000609182 354 ntBASIC18.4■□□□□ 0.54
CSF1P09603 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CSF1P09603 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CSF1P09603 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSF1P09603 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CSF1P09603 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CSF1P09603 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CSF1P09603 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSF1P09603 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSF1P09603 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSF1P09603 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.39■□□□□ 0.53
CSF1P09603 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.39■□□□□ 0.53
CSF1P09603 MIR4281-201ENST00000580852 62 ntBASIC18.39■□□□□ 0.53
CSF1P09603 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSF1P09603 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.39■□□□□ 0.53
CSF1P09603 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CSF1P09603 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CSF1P09603 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSF1P09603 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSF1P09603 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.38■□□□□ 0.53
CSF1P09603 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CSF1P09603 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.38■□□□□ 0.53
CSF1P09603 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.38■□□□□ 0.53
CSF1P09603 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CSF1P09603 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.38■□□□□ 0.53
CSF1P09603 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CSF1P09603 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSF1P09603 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CSF1P09603 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms