Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL4A2P08572 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL4A2P08572 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL4A2P08572 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
COL4A2P08572 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL4A2P08572 PRORSD1P-201ENST00000295112 541 ntBASIC21.84■■□□□ 1.09
COL4A2P08572 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL4A2P08572 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.84■■□□□ 1.09
COL4A2P08572 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
COL4A2P08572 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.84■■□□□ 1.09
COL4A2P08572 MIR4758-201ENST00000577688 71 ntBASIC21.84■■□□□ 1.09
COL4A2P08572 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.84■■□□□ 1.09
COL4A2P08572 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.84■■□□□ 1.09
COL4A2P08572 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.84■■□□□ 1.09
COL4A2P08572 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.84■■□□□ 1.09
COL4A2P08572 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A2P08572 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A2P08572 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.83■■□□□ 1.09
COL4A2P08572 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
COL4A2P08572 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
COL4A2P08572 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.83■■□□□ 1.09
COL4A2P08572 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
COL4A2P08572 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A2P08572 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.83■■□□□ 1.09
COL4A2P08572 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A2P08572 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A2P08572 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A2P08572 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A2P08572 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A2P08572 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A2P08572 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A2P08572 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A2P08572 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
COL4A2P08572 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A2P08572 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A2P08572 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.83■■□□□ 1.08
COL4A2P08572 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.83■■□□□ 1.08
COL4A2P08572 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.83■■□□□ 1.08
COL4A2P08572 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.83■■□□□ 1.08
COL4A2P08572 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.83■■□□□ 1.08
COL4A2P08572 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.83■■□□□ 1.08
COL4A2P08572 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A2P08572 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A2P08572 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A2P08572 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
COL4A2P08572 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A2P08572 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A2P08572 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A2P08572 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
COL4A2P08572 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A2P08572 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A2P08572 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL4A2P08572 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A2P08572 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A2P08572 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
COL4A2P08572 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.81■■□□□ 1.08
COL4A2P08572 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A2P08572 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A2P08572 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A2P08572 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A2P08572 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.8■■□□□ 1.08
COL4A2P08572 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.8■■□□□ 1.08
COL4A2P08572 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A2P08572 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.8■■□□□ 1.08
COL4A2P08572 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.8■■□□□ 1.08
COL4A2P08572 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 AL512625.2-201ENST00000417533 625 ntBASIC21.8■■□□□ 1.08
COL4A2P08572 BX276092.2-201ENST00000417668 665 ntBASIC21.8■■□□□ 1.08
COL4A2P08572 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
COL4A2P08572 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A2P08572 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.8■■□□□ 1.08
COL4A2P08572 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
COL4A2P08572 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A2P08572 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.8■■□□□ 1.08
COL4A2P08572 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A2P08572 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A2P08572 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A2P08572 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A2P08572 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A2P08572 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A2P08572 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A2P08572 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A2P08572 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A2P08572 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A2P08572 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A2P08572 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A2P08572 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
COL4A2P08572 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.78■■□□□ 1.08
COL4A2P08572 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.78■■□□□ 1.08
COL4A2P08572 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.78■■□□□ 1.08
COL4A2P08572 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A2P08572 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms