Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.59■■■□□ 2.17
COL5A2P05997 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
COL5A2P05997 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC28.59■■■□□ 2.17
COL5A2P05997 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL5A2P05997 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC28.59■■■□□ 2.17
COL5A2P05997 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL5A2P05997 ESRRAP1-201ENST00000400596 1257 ntBASIC28.59■■■□□ 2.17
COL5A2P05997 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC28.59■■■□□ 2.17
COL5A2P05997 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC28.59■■■□□ 2.17
COL5A2P05997 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL5A2P05997 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
COL5A2P05997 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
COL5A2P05997 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.58■■■□□ 2.17
COL5A2P05997 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC28.58■■■□□ 2.17
COL5A2P05997 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC28.58■■■□□ 2.17
COL5A2P05997 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
COL5A2P05997 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
COL5A2P05997 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC28.58■■■□□ 2.17
COL5A2P05997 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
COL5A2P05997 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL5A2P05997 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC28.57■■■□□ 2.16
COL5A2P05997 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
COL5A2P05997 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC28.57■■■□□ 2.16
COL5A2P05997 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC28.57■■■□□ 2.16
COL5A2P05997 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
COL5A2P05997 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC28.57■■■□□ 2.16
COL5A2P05997 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL5A2P05997 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL5A2P05997 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL5A2P05997 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC28.56■■■□□ 2.16
COL5A2P05997 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC28.56■■■□□ 2.16
COL5A2P05997 AC091874.3-201ENST00000512672 1195 ntBASIC28.56■■■□□ 2.16
COL5A2P05997 IRX5-204ENST00000560154 879 ntTSL 5 BASIC28.56■■■□□ 2.16
COL5A2P05997 AL034346.1-201ENST00000568244 1277 ntBASIC28.56■■■□□ 2.16
COL5A2P05997 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC28.56■■■□□ 2.16
COL5A2P05997 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
COL5A2P05997 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL5A2P05997 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
COL5A2P05997 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC28.55■■■□□ 2.16
COL5A2P05997 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
COL5A2P05997 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
COL5A2P05997 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
COL5A2P05997 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC28.55■■■□□ 2.16
COL5A2P05997 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
COL5A2P05997 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL5A2P05997 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC28.54■■■□□ 2.16
COL5A2P05997 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC28.54■■■□□ 2.16
COL5A2P05997 AC008694.1-202ENST00000636953 945 ntBASIC28.54■■■□□ 2.16
COL5A2P05997 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL5A2P05997 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
COL5A2P05997 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL5A2P05997 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL5A2P05997 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL5A2P05997 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL5A2P05997 AL596275.1-201ENST00000423464 877 ntBASIC28.53■■■□□ 2.16
COL5A2P05997 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
COL5A2P05997 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC28.53■■■□□ 2.16
COL5A2P05997 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC28.53■■■□□ 2.16
COL5A2P05997 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC28.53■■■□□ 2.16
COL5A2P05997 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL5A2P05997 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC28.53■■■□□ 2.16
COL5A2P05997 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL5A2P05997 LINC00526-201ENST00000581067 1875 ntBASIC28.53■■■□□ 2.16
COL5A2P05997 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC28.53■■■□□ 2.16
COL5A2P05997 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
COL5A2P05997 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC28.53■■■□□ 2.16
COL5A2P05997 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC28.53■■■□□ 2.16
COL5A2P05997 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC28.53■■■□□ 2.16
COL5A2P05997 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
COL5A2P05997 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC28.52■■■□□ 2.16
COL5A2P05997 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 ISCU-212ENST00000547005 795 ntTSL 3 BASIC28.52■■■□□ 2.16
COL5A2P05997 AC006058.3-201ENST00000606217 1069 ntBASIC28.52■■■□□ 2.16
COL5A2P05997 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
COL5A2P05997 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC28.52■■■□□ 2.16
COL5A2P05997 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
COL5A2P05997 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL5A2P05997 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL5A2P05997 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL5A2P05997 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
COL5A2P05997 BET1L-207ENST00000529614 560 ntTSL 5 BASIC28.51■■■□□ 2.15
COL5A2P05997 AC092068.2-201ENST00000590491 1708 ntBASIC28.51■■■□□ 2.15
COL5A2P05997 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC28.51■■■□□ 2.15
COL5A2P05997 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC28.51■■■□□ 2.15
COL5A2P05997 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL5A2P05997 FGF8-207ENST00000618991 856 ntTSL 3 BASIC28.51■■■□□ 2.15
COL5A2P05997 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
COL5A2P05997 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC28.51■■■□□ 2.15
COL5A2P05997 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC28.51■■■□□ 2.15
COL5A2P05997 OR7E47P-201ENST00000546390 1422 ntBASIC28.5■■■□□ 2.15
COL5A2P05997 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms