Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ERBB2P04626 BX005040.4-201ENST00000637145 1518 ntBASIC22.57■■□□□ 1.2
ERBB2P04626 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.56■■□□□ 1.2
ERBB2P04626 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ERBB2P04626 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ERBB2P04626 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ERBB2P04626 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
ERBB2P04626 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ERBB2P04626 AL354811.1-201ENST00000610286 706 ntBASIC22.56■■□□□ 1.2
ERBB2P04626 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.56■■□□□ 1.2
ERBB2P04626 AP006587.3-201ENST00000525742 1516 ntBASIC22.56■■□□□ 1.2
ERBB2P04626 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
ERBB2P04626 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.56■■□□□ 1.2
ERBB2P04626 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
ERBB2P04626 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
ERBB2P04626 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.55■■□□□ 1.2
ERBB2P04626 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.55■■□□□ 1.2
ERBB2P04626 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.55■■□□□ 1.2
ERBB2P04626 AL358852.1-201ENST00000623174 1268 ntBASIC22.55■■□□□ 1.2
ERBB2P04626 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.55■■□□□ 1.2
ERBB2P04626 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.55■■□□□ 1.2
ERBB2P04626 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ERBB2P04626 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.54■■□□□ 1.2
ERBB2P04626 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.54■■□□□ 1.2
ERBB2P04626 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
ERBB2P04626 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERBB2P04626 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERBB2P04626 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.54■■□□□ 1.2
ERBB2P04626 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.54■■□□□ 1.2
ERBB2P04626 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.54■■□□□ 1.2
ERBB2P04626 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.54■■□□□ 1.2
ERBB2P04626 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERBB2P04626 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ERBB2P04626 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERBB2P04626 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
ERBB2P04626 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERBB2P04626 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
ERBB2P04626 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERBB2P04626 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
ERBB2P04626 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
ERBB2P04626 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.53■■□□□ 1.2
ERBB2P04626 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
ERBB2P04626 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.53■■□□□ 1.2
ERBB2P04626 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
ERBB2P04626 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ERBB2P04626 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
ERBB2P04626 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.53■■□□□ 1.2
ERBB2P04626 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
ERBB2P04626 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERBB2P04626 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.53■■□□□ 1.2
ERBB2P04626 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERBB2P04626 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.52■■□□□ 1.2
ERBB2P04626 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.52■■□□□ 1.2
ERBB2P04626 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.52■■□□□ 1.2
ERBB2P04626 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
ERBB2P04626 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ERBB2P04626 AC005224.4-201ENST00000583262 1652 ntBASIC22.52■■□□□ 1.2
ERBB2P04626 AC003102.1-202ENST00000563394 1796 ntBASIC22.51■■□□□ 1.19
ERBB2P04626 AC009237.3-201ENST00000393279 1427 ntBASIC22.51■■□□□ 1.19
ERBB2P04626 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ERBB2P04626 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.51■■□□□ 1.19
ERBB2P04626 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.51■■□□□ 1.19
ERBB2P04626 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ERBB2P04626 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
ERBB2P04626 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.51■■□□□ 1.19
ERBB2P04626 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.51■■□□□ 1.19
ERBB2P04626 TPRG1LP1-201ENST00000598702 760 ntBASIC22.51■■□□□ 1.19
ERBB2P04626 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.51■■□□□ 1.19
ERBB2P04626 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ERBB2P04626 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.5■■□□□ 1.19
ERBB2P04626 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ERBB2P04626 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ERBB2P04626 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ERBB2P04626 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
ERBB2P04626 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ERBB2P04626 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
ERBB2P04626 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms