Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC066615.1-201ENST00000640911 628 ntBASIC19.95■□□□□ 0.78
PDGFAP04085 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFAP04085 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFAP04085 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 AC005224.4-201ENST00000583262 1652 ntBASIC19.94■□□□□ 0.78
PDGFAP04085 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDGFAP04085 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PDGFAP04085 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.94■□□□□ 0.78
PDGFAP04085 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDGFAP04085 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.94■□□□□ 0.78
PDGFAP04085 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.94■□□□□ 0.78
PDGFAP04085 UBE2DNL-204ENST00000602536 740 ntBASIC19.94■□□□□ 0.78
PDGFAP04085 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 DUSP8P5-201ENST00000422884 1815 ntBASIC19.94■□□□□ 0.78
PDGFAP04085 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDGFAP04085 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.94■□□□□ 0.78
PDGFAP04085 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.94■□□□□ 0.78
PDGFAP04085 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.94■□□□□ 0.78
PDGFAP04085 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFAP04085 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 KRT87P-202ENST00000534226 1464 ntBASIC19.93■□□□□ 0.78
PDGFAP04085 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 AC004812.2-201ENST00000611079 2094 ntBASIC19.93■□□□□ 0.78
PDGFAP04085 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.93■□□□□ 0.78
PDGFAP04085 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 KRT18P6-201ENST00000555540 1265 ntBASIC19.93■□□□□ 0.78
PDGFAP04085 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFAP04085 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.93■□□□□ 0.78
PDGFAP04085 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.93■□□□□ 0.78
PDGFAP04085 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFAP04085 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFAP04085 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.93■□□□□ 0.78
PDGFAP04085 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFAP04085 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFAP04085 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.92■□□□□ 0.78
PDGFAP04085 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFAP04085 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFAP04085 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.92■□□□□ 0.78
PDGFAP04085 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFAP04085 AC005181.1-201ENST00000604782 1256 ntBASIC19.92■□□□□ 0.78
PDGFAP04085 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFAP04085 AC231657.2-201ENST00000624556 255 ntBASIC19.92■□□□□ 0.78
PDGFAP04085 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFAP04085 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFAP04085 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDGFAP04085 LINC00565-201ENST00000562710 2331 ntBASIC19.92■□□□□ 0.78
PDGFAP04085 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFAP04085 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFAP04085 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.91■□□□□ 0.78
PDGFAP04085 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFAP04085 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PDGFAP04085 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.91■□□□□ 0.78
PDGFAP04085 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PDGFAP04085 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.91■□□□□ 0.78
PDGFAP04085 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFAP04085 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PDGFAP04085 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.91■□□□□ 0.78
PDGFAP04085 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFAP04085 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.91■□□□□ 0.78
PDGFAP04085 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.91■□□□□ 0.78
PDGFAP04085 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.91■□□□□ 0.78
PDGFAP04085 MIR4651-201ENST00000582622 73 ntBASIC19.91■□□□□ 0.78
PDGFAP04085 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.91■□□□□ 0.78
PDGFAP04085 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFAP04085 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFAP04085 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.91■□□□□ 0.78
PDGFAP04085 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.91■□□□□ 0.78
PDGFAP04085 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFAP04085 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFAP04085 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFAP04085 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PDGFAP04085 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 AL117328.2-201ENST00000624617 1940 ntBASIC19.9■□□□□ 0.78
PDGFAP04085 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFAP04085 AC007322.1-201ENST00000426983 750 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms