Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A1P02452 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A1P02452 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL1A1P02452 GUSBP6-202ENST00000438529 1198 ntBASIC25.98■■□□□ 1.75
COL1A1P02452 EEF1DP3-203ENST00000566025 782 ntBASIC25.98■■□□□ 1.75
COL1A1P02452 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.98■■□□□ 1.75
COL1A1P02452 TMEM191A-211ENST00000637163 1067 ntBASIC25.98■■□□□ 1.75
COL1A1P02452 MYCNOS-205ENST00000641950 531 ntBASIC25.98■■□□□ 1.75
COL1A1P02452 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A1P02452 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A1P02452 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A1P02452 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.98■■□□□ 1.75
COL1A1P02452 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A1P02452 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
COL1A1P02452 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A1P02452 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL1A1P02452 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.98■■□□□ 1.75
COL1A1P02452 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.98■■□□□ 1.75
COL1A1P02452 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
COL1A1P02452 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.98■■□□□ 1.75
COL1A1P02452 SLC7A5P2-201ENST00000553010 536 ntBASIC25.98■■□□□ 1.75
COL1A1P02452 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.98■■□□□ 1.75
COL1A1P02452 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A1P02452 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A1P02452 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A1P02452 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
COL1A1P02452 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
COL1A1P02452 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.97■■□□□ 1.75
COL1A1P02452 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.97■■□□□ 1.75
COL1A1P02452 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
COL1A1P02452 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.97■■□□□ 1.75
COL1A1P02452 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.97■■□□□ 1.75
COL1A1P02452 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
COL1A1P02452 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A1P02452 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.97■■□□□ 1.75
COL1A1P02452 AC138907.5-202ENST00000569484 235 ntBASIC25.97■■□□□ 1.75
COL1A1P02452 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A1P02452 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.97■■□□□ 1.75
COL1A1P02452 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL1A1P02452 C1orf229-201ENST00000623686 2258 ntBASIC25.97■■□□□ 1.75
COL1A1P02452 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A1P02452 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A1P02452 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.96■■□□□ 1.75
COL1A1P02452 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A1P02452 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A1P02452 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A1P02452 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.96■■□□□ 1.75
COL1A1P02452 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A1P02452 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.96■■□□□ 1.75
COL1A1P02452 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A1P02452 DUX4L16-201ENST00000555130 1264 ntBASIC25.96■■□□□ 1.75
COL1A1P02452 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.96■■□□□ 1.75
COL1A1P02452 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.96■■□□□ 1.75
COL1A1P02452 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.96■■□□□ 1.75
COL1A1P02452 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.96■■□□□ 1.75
COL1A1P02452 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.96■■□□□ 1.75
COL1A1P02452 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL1A1P02452 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
COL1A1P02452 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.95■■□□□ 1.75
COL1A1P02452 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
COL1A1P02452 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL1A1P02452 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL1A1P02452 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL1A1P02452 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
COL1A1P02452 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.95■■□□□ 1.74
COL1A1P02452 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.94■■□□□ 1.74
COL1A1P02452 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.94■■□□□ 1.74
COL1A1P02452 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL1A1P02452 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL1A1P02452 TSPY6P-201ENST00000448518 926 ntBASIC25.94■■□□□ 1.74
COL1A1P02452 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.94■■□□□ 1.74
COL1A1P02452 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.94■■□□□ 1.74
COL1A1P02452 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.94■■□□□ 1.74
COL1A1P02452 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL1A1P02452 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL1A1P02452 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL1A1P02452 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL1A1P02452 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL1A1P02452 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL1A1P02452 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
COL1A1P02452 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL1A1P02452 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.93■■□□□ 1.74
COL1A1P02452 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
COL1A1P02452 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL1A1P02452 AC080038.3-201ENST00000623346 1952 ntBASIC25.93■■□□□ 1.74
COL1A1P02452 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A1P02452 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A1P02452 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.92■■□□□ 1.74
COL1A1P02452 CNN2P6-201ENST00000439038 900 ntBASIC25.92■■□□□ 1.74
COL1A1P02452 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.92■■□□□ 1.74
COL1A1P02452 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A1P02452 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A1P02452 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A1P02452 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A1P02452 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL1A1P02452 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.91■■□□□ 1.74
COL1A1P02452 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A1P02452 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.91■■□□□ 1.74
COL1A1P02452 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.91■■□□□ 1.74
COL1A1P02452 KRT18P6-201ENST00000555540 1265 ntBASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms