Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.11■□□□□ 0.17
LTAP01374 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LTAP01374 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LTAP01374 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LTAP01374 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LTAP01374 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.11■□□□□ 0.17
LTAP01374 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LTAP01374 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LTAP01374 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LTAP01374 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.1■□□□□ 0.17
LTAP01374 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.1■□□□□ 0.17
LTAP01374 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.1■□□□□ 0.17
LTAP01374 NTF6A-201ENST00000591175 560 ntBASIC16.1■□□□□ 0.17
LTAP01374 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.1■□□□□ 0.17
LTAP01374 AL049796.1-201ENST00000565336 1766 ntBASIC16.1■□□□□ 0.17
LTAP01374 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LTAP01374 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.1■□□□□ 0.17
LTAP01374 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LTAP01374 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
LTAP01374 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LTAP01374 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LTAP01374 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.09■□□□□ 0.17
LTAP01374 ATP5G2P3-201ENST00000429083 425 ntBASIC16.09■□□□□ 0.17
LTAP01374 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LTAP01374 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.09■□□□□ 0.17
LTAP01374 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LTAP01374 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.09■□□□□ 0.17
LTAP01374 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LTAP01374 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LTAP01374 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
LTAP01374 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.17
LTAP01374 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LTAP01374 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.08■□□□□ 0.16
LTAP01374 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LTAP01374 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.08■□□□□ 0.16
LTAP01374 AC004987.1-201ENST00000428627 508 ntBASIC16.08■□□□□ 0.16
LTAP01374 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.08■□□□□ 0.16
LTAP01374 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.08■□□□□ 0.16
LTAP01374 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LTAP01374 AL499627.2-201ENST00000606283 725 ntBASIC16.08■□□□□ 0.16
LTAP01374 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.08■□□□□ 0.16
LTAP01374 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LTAP01374 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LTAP01374 OR7E47P-201ENST00000546390 1422 ntBASIC16.08■□□□□ 0.16
LTAP01374 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.08■□□□□ 0.16
LTAP01374 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.08■□□□□ 0.16
LTAP01374 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.08■□□□□ 0.16
LTAP01374 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.08■□□□□ 0.16
LTAP01374 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LTAP01374 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.07■□□□□ 0.16
LTAP01374 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
LTAP01374 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LTAP01374 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.07■□□□□ 0.16
LTAP01374 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LTAP01374 AL031602.1-201ENST00000633169 911 ntBASIC16.07■□□□□ 0.16
LTAP01374 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LTAP01374 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.07■□□□□ 0.16
LTAP01374 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.07■□□□□ 0.16
LTAP01374 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.07■□□□□ 0.16
LTAP01374 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
LTAP01374 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LTAP01374 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LTAP01374 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms