Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.98■■□□□ 1.43
PGK1P00558 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.98■■□□□ 1.43
PGK1P00558 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.98■■□□□ 1.43
PGK1P00558 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PGK1P00558 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PGK1P00558 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PGK1P00558 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PGK1P00558 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PGK1P00558 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.98■■□□□ 1.43
PGK1P00558 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PGK1P00558 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PGK1P00558 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.98■■□□□ 1.43
PGK1P00558 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PGK1P00558 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PGK1P00558 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.97■■□□□ 1.43
PGK1P00558 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.97■■□□□ 1.43
PGK1P00558 OR7E47P-201ENST00000546390 1422 ntBASIC23.97■■□□□ 1.43
PGK1P00558 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PGK1P00558 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.97■■□□□ 1.43
PGK1P00558 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PGK1P00558 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PGK1P00558 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
PGK1P00558 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PGK1P00558 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PGK1P00558 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.96■■□□□ 1.43
PGK1P00558 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.96■■□□□ 1.43
PGK1P00558 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PGK1P00558 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.96■■□□□ 1.43
PGK1P00558 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PGK1P00558 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
PGK1P00558 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.96■■□□□ 1.43
PGK1P00558 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PGK1P00558 AC016405.3-201ENST00000607710 860 ntBASIC23.96■■□□□ 1.43
PGK1P00558 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.96■■□□□ 1.43
PGK1P00558 LINC00526-201ENST00000581067 1875 ntBASIC23.96■■□□□ 1.43
PGK1P00558 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PGK1P00558 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.96■■□□□ 1.43
PGK1P00558 AC092068.2-201ENST00000590491 1708 ntBASIC23.96■■□□□ 1.43
PGK1P00558 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PGK1P00558 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PGK1P00558 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PGK1P00558 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
PGK1P00558 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PGK1P00558 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.95■■□□□ 1.42
PGK1P00558 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PGK1P00558 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.95■■□□□ 1.42
PGK1P00558 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PGK1P00558 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGK1P00558 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PGK1P00558 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGK1P00558 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGK1P00558 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGK1P00558 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PGK1P00558 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGK1P00558 AC007322.4-201ENST00000509611 723 ntBASIC23.94■■□□□ 1.42
PGK1P00558 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.94■■□□□ 1.42
PGK1P00558 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.94■■□□□ 1.42
PGK1P00558 AC053503.5-201ENST00000601508 636 ntBASIC23.94■■□□□ 1.42
PGK1P00558 OR10C1-204ENST00000622521 1039 ntBASIC23.94■■□□□ 1.42
PGK1P00558 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGK1P00558 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
PGK1P00558 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PGK1P00558 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PGK1P00558 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PGK1P00558 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.93■■□□□ 1.42
PGK1P00558 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PGK1P00558 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
PGK1P00558 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.93■■□□□ 1.42
PGK1P00558 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
PGK1P00558 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.93■■□□□ 1.42
PGK1P00558 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PGK1P00558 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.93■■□□□ 1.42
PGK1P00558 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.92■■□□□ 1.42
PGK1P00558 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PGK1P00558 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PGK1P00558 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PGK1P00558 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.92■■□□□ 1.42
PGK1P00558 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.92■■□□□ 1.42
PGK1P00558 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
PGK1P00558 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.92■■□□□ 1.42
PGK1P00558 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.92■■□□□ 1.42
PGK1P00558 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.92■■□□□ 1.42
PGK1P00558 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PGK1P00558 AC092118.2-201ENST00000613495 667 ntBASIC23.92■■□□□ 1.42
PGK1P00558 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PGK1P00558 AC008694.1-202ENST00000636953 945 ntBASIC23.92■■□□□ 1.42
PGK1P00558 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PGK1P00558 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.92■■□□□ 1.42
PGK1P00558 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
PGK1P00558 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.91■■□□□ 1.42
PGK1P00558 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PGK1P00558 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PGK1P00558 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PGK1P00558 AP006587.3-201ENST00000525742 1516 ntBASIC23.91■■□□□ 1.42
PGK1P00558 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PGK1P00558 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.91■■□□□ 1.42
PGK1P00558 RPS2P52-201ENST00000469610 820 ntBASIC23.91■■□□□ 1.42
PGK1P00558 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
PGK1P00558 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.91■■□□□ 1.42
PGK1P00558 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms