Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.55■■□□□ 1.2
RTN3O95197 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN3O95197 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN3O95197 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN3O95197 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RTN3O95197 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RTN3O95197 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN3O95197 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN3O95197 KRT87P-202ENST00000534226 1464 ntBASIC22.54■■□□□ 1.2
RTN3O95197 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN3O95197 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN3O95197 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RTN3O95197 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.54■■□□□ 1.2
RTN3O95197 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTN3O95197 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN3O95197 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.54■■□□□ 1.2
RTN3O95197 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN3O95197 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.54■■□□□ 1.2
RTN3O95197 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN3O95197 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RTN3O95197 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.53■■□□□ 1.2
RTN3O95197 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN3O95197 SLC25A24-204ENST00000569674 2357 ntBASIC22.53■■□□□ 1.2
RTN3O95197 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.53■■□□□ 1.2
RTN3O95197 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.53■■□□□ 1.2
RTN3O95197 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.53■■□□□ 1.2
RTN3O95197 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.53■■□□□ 1.2
RTN3O95197 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.53■■□□□ 1.2
RTN3O95197 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RTN3O95197 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN3O95197 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN3O95197 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.53■■□□□ 1.2
RTN3O95197 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN3O95197 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN3O95197 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.52■■□□□ 1.2
RTN3O95197 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN3O95197 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN3O95197 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.52■■□□□ 1.2
RTN3O95197 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
RTN3O95197 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.52■■□□□ 1.2
RTN3O95197 AC092437.1-201ENST00000624794 1048 ntBASIC22.52■■□□□ 1.2
RTN3O95197 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN3O95197 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN3O95197 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN3O95197 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN3O95197 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RTN3O95197 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
RTN3O95197 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RTN3O95197 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RTN3O95197 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.52■■□□□ 1.19
RTN3O95197 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTN3O95197 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTN3O95197 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.51■■□□□ 1.19
RTN3O95197 C1orf229-201ENST00000623686 2258 ntBASIC22.51■■□□□ 1.19
RTN3O95197 AC127496.7-201ENST00000625110 1798 ntBASIC22.51■■□□□ 1.19
RTN3O95197 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTN3O95197 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.51■■□□□ 1.19
RTN3O95197 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.51■■□□□ 1.19
RTN3O95197 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTN3O95197 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RTN3O95197 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTN3O95197 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTN3O95197 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.5■■□□□ 1.19
RTN3O95197 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTN3O95197 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.5■■□□□ 1.19
RTN3O95197 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.5■■□□□ 1.19
RTN3O95197 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.5■■□□□ 1.19
RTN3O95197 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.5■■□□□ 1.19
RTN3O95197 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
RTN3O95197 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.5■■□□□ 1.19
RTN3O95197 AC137761.2-201ENST00000561729 223 ntBASIC22.5■■□□□ 1.19
RTN3O95197 AC145350.3-201ENST00000569033 163 ntBASIC22.5■■□□□ 1.19
RTN3O95197 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTN3O95197 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RTN3O95197 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RTN3O95197 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.5■■□□□ 1.19
RTN3O95197 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTN3O95197 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
RTN3O95197 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTN3O95197 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTN3O95197 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.49■■□□□ 1.19
RTN3O95197 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTN3O95197 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.49■■□□□ 1.19
RTN3O95197 AP006587.3-201ENST00000525742 1516 ntBASIC22.49■■□□□ 1.19
RTN3O95197 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTN3O95197 C9orf163-202ENST00000624034 2573 ntBASIC22.49■■□□□ 1.19
RTN3O95197 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTN3O95197 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.49■■□□□ 1.19
RTN3O95197 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTN3O95197 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTN3O95197 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTN3O95197 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTN3O95197 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.48■■□□□ 1.19
RTN3O95197 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTN3O95197 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTN3O95197 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.48■■□□□ 1.19
RTN3O95197 AC016769.1-201ENST00000409132 1010 ntBASIC22.48■■□□□ 1.19
RTN3O95197 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.48■■□□□ 1.19
RTN3O95197 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.48■■□□□ 1.19
RTN3O95197 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms