Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.34■□□□□ 0.69
CLPXO76031 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CLPXO76031 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLPXO76031 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.34■□□□□ 0.69
CLPXO76031 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.34■□□□□ 0.69
CLPXO76031 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.34■□□□□ 0.69
CLPXO76031 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLPXO76031 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLPXO76031 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPXO76031 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.34■□□□□ 0.69
CLPXO76031 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.34■□□□□ 0.69
CLPXO76031 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CLPXO76031 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CLPXO76031 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLPXO76031 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CLPXO76031 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.33■□□□□ 0.68
CLPXO76031 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.33■□□□□ 0.68
CLPXO76031 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.33■□□□□ 0.68
CLPXO76031 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CLPXO76031 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.33■□□□□ 0.68
CLPXO76031 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CLPXO76031 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPXO76031 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CLPXO76031 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.32■□□□□ 0.68
CLPXO76031 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 YBX1P4-201ENST00000392794 808 ntBASIC19.32■□□□□ 0.68
CLPXO76031 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.32■□□□□ 0.68
CLPXO76031 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.32■□□□□ 0.68
CLPXO76031 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CLPXO76031 AC144652.1-201ENST00000609974 1624 ntBASIC19.32■□□□□ 0.68
CLPXO76031 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.32■□□□□ 0.68
CLPXO76031 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPXO76031 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.31■□□□□ 0.68
CLPXO76031 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.31■□□□□ 0.68
CLPXO76031 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.31■□□□□ 0.68
CLPXO76031 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 AFG3L1P-217ENST00000557444 2447 ntBASIC19.31■□□□□ 0.68
CLPXO76031 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPXO76031 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.3■□□□□ 0.68
CLPXO76031 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.3■□□□□ 0.68
CLPXO76031 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.3■□□□□ 0.68
CLPXO76031 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.3■□□□□ 0.68
CLPXO76031 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 KRT8P33-201ENST00000508125 1423 ntBASIC19.3■□□□□ 0.68
CLPXO76031 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPXO76031 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLPXO76031 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms