Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NPHS1O60500 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NPHS1O60500 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.87■□□□□ 0.93
NPHS1O60500 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 AL356740.2-201ENST00000601559 647 ntBASIC20.87■□□□□ 0.93
NPHS1O60500 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.87■□□□□ 0.93
NPHS1O60500 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.87■□□□□ 0.93
NPHS1O60500 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.87■□□□□ 0.93
NPHS1O60500 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.87■□□□□ 0.93
NPHS1O60500 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.86■□□□□ 0.93
NPHS1O60500 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPHS1O60500 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPHS1O60500 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPHS1O60500 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.86■□□□□ 0.93
NPHS1O60500 AL034346.1-201ENST00000568244 1277 ntBASIC20.86■□□□□ 0.93
NPHS1O60500 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPHS1O60500 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPHS1O60500 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPHS1O60500 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NPHS1O60500 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.86■□□□□ 0.93
NPHS1O60500 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NPHS1O60500 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPHS1O60500 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NPHS1O60500 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPHS1O60500 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.85■□□□□ 0.93
NPHS1O60500 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPHS1O60500 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NPHS1O60500 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.85■□□□□ 0.93
NPHS1O60500 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPHS1O60500 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPHS1O60500 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPHS1O60500 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPHS1O60500 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.85■□□□□ 0.93
NPHS1O60500 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPHS1O60500 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NPHS1O60500 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPHS1O60500 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.85■□□□□ 0.93
NPHS1O60500 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.84■□□□□ 0.93
NPHS1O60500 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.84■□□□□ 0.93
NPHS1O60500 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NPHS1O60500 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.84■□□□□ 0.93
NPHS1O60500 AC092171.4-201ENST00000609130 632 ntBASIC20.84■□□□□ 0.93
NPHS1O60500 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.84■□□□□ 0.93
NPHS1O60500 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.84■□□□□ 0.93
NPHS1O60500 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
NPHS1O60500 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPHS1O60500 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.84■□□□□ 0.93
NPHS1O60500 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPHS1O60500 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPHS1O60500 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NPHS1O60500 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.83■□□□□ 0.93
NPHS1O60500 MIR3621-201ENST00000580529 85 ntBASIC20.83■□□□□ 0.93
NPHS1O60500 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.83■□□□□ 0.93
NPHS1O60500 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
NPHS1O60500 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPHS1O60500 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
NPHS1O60500 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPHS1O60500 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPHS1O60500 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NPHS1O60500 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPHS1O60500 SLC25A24-204ENST00000569674 2357 ntBASIC20.82■□□□□ 0.92
NPHS1O60500 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NPHS1O60500 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NPHS1O60500 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.82■□□□□ 0.92
NPHS1O60500 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.82■□□□□ 0.92
NPHS1O60500 AC010525.1-201ENST00000585559 441 ntBASIC20.82■□□□□ 0.92
NPHS1O60500 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.82■□□□□ 0.92
NPHS1O60500 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPHS1O60500 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPHS1O60500 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
NPHS1O60500 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NPHS1O60500 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.81■□□□□ 0.92
NPHS1O60500 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPHS1O60500 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.81■□□□□ 0.92
NPHS1O60500 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms