Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC104564.3-201ENST00000582367 638 ntBASIC20.62■□□□□ 0.89
PRICKLE3O43900 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.62■□□□□ 0.89
PRICKLE3O43900 MIR5787-201ENST00000611784 55 ntBASIC20.62■□□□□ 0.89
PRICKLE3O43900 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRICKLE3O43900 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRICKLE3O43900 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRICKLE3O43900 FAM99A-202ENST00000538190 1989 ntBASIC20.61■□□□□ 0.89
PRICKLE3O43900 AC026471.6-201ENST00000622954 1905 ntBASIC20.61■□□□□ 0.89
PRICKLE3O43900 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
PRICKLE3O43900 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE3O43900 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE3O43900 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE3O43900 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PRICKLE3O43900 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE3O43900 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.61■□□□□ 0.89
PRICKLE3O43900 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE3O43900 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.61■□□□□ 0.89
PRICKLE3O43900 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE3O43900 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE3O43900 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE3O43900 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE3O43900 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.6■□□□□ 0.89
PRICKLE3O43900 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE3O43900 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
PRICKLE3O43900 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE3O43900 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PRICKLE3O43900 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.6■□□□□ 0.89
PRICKLE3O43900 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE3O43900 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE3O43900 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.6■□□□□ 0.89
PRICKLE3O43900 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.6■□□□□ 0.89
PRICKLE3O43900 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.59■□□□□ 0.89
PRICKLE3O43900 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.59■□□□□ 0.89
PRICKLE3O43900 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 KRT18P61-201ENST00000585825 1298 ntBASIC20.59■□□□□ 0.89
PRICKLE3O43900 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.59■□□□□ 0.89
PRICKLE3O43900 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.59■□□□□ 0.89
PRICKLE3O43900 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE3O43900 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE3O43900 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE3O43900 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRICKLE3O43900 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.58■□□□□ 0.89
PRICKLE3O43900 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE3O43900 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.58■□□□□ 0.89
PRICKLE3O43900 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.58■□□□□ 0.89
PRICKLE3O43900 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.58■□□□□ 0.89
PRICKLE3O43900 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE3O43900 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE3O43900 EP400NL-214ENST00000641289 2402 ntBASIC20.58■□□□□ 0.88
PRICKLE3O43900 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.58■□□□□ 0.88
PRICKLE3O43900 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRICKLE3O43900 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRICKLE3O43900 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRICKLE3O43900 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRICKLE3O43900 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
PRICKLE3O43900 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE3O43900 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 AP004607.4-201ENST00000530158 1459 ntBASIC20.57■□□□□ 0.88
PRICKLE3O43900 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE3O43900 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 AL162430.1-201ENST00000480705 870 ntBASIC20.57■□□□□ 0.88
PRICKLE3O43900 AC079140.4-201ENST00000507448 529 ntBASIC20.57■□□□□ 0.88
PRICKLE3O43900 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.57■□□□□ 0.88
PRICKLE3O43900 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE3O43900 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 KRT18P5-201ENST00000436075 1291 ntBASIC20.56■□□□□ 0.88
PRICKLE3O43900 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms